Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TSSC4Q9Y5U2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TSSC4Q9Y5U2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TSSC4Q9Y5U2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.46■□□□□ 0.39
TSSC4Q9Y5U2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TSSC4Q9Y5U2 AC233992.3-201ENST00000607491 485 ntBASIC17.46■□□□□ 0.39
TSSC4Q9Y5U2 pRNA.6-201ENST00000610482 90 ntBASIC17.46■□□□□ 0.39
TSSC4Q9Y5U2 pRNA.5-201ENST00000612139 90 ntBASIC17.46■□□□□ 0.39
TSSC4Q9Y5U2 pRNA.11-201ENST00000618423 90 ntBASIC17.46■□□□□ 0.39
TSSC4Q9Y5U2 pRNA.13-201ENST00000619112 90 ntBASIC17.46■□□□□ 0.39
TSSC4Q9Y5U2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TSSC4Q9Y5U2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TSSC4Q9Y5U2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TSSC4Q9Y5U2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TSSC4Q9Y5U2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TSSC4Q9Y5U2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TSSC4Q9Y5U2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TSSC4Q9Y5U2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TSSC4Q9Y5U2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.45■□□□□ 0.38
TSSC4Q9Y5U2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TSSC4Q9Y5U2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TSSC4Q9Y5U2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TSSC4Q9Y5U2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TSSC4Q9Y5U2 BX842568.3-201ENST00000418104 571 ntBASIC17.45■□□□□ 0.38
TSSC4Q9Y5U2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TSSC4Q9Y5U2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.45■□□□□ 0.38
TSSC4Q9Y5U2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.45■□□□□ 0.38
TSSC4Q9Y5U2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TSSC4Q9Y5U2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TSSC4Q9Y5U2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.45■□□□□ 0.38
TSSC4Q9Y5U2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.44■□□□□ 0.38
TSSC4Q9Y5U2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TSSC4Q9Y5U2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TSSC4Q9Y5U2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.44■□□□□ 0.38
TSSC4Q9Y5U2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TSSC4Q9Y5U2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TSSC4Q9Y5U2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.44■□□□□ 0.38
TSSC4Q9Y5U2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.44■□□□□ 0.38
TSSC4Q9Y5U2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.44■□□□□ 0.38
TSSC4Q9Y5U2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TSSC4Q9Y5U2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.44■□□□□ 0.38
TSSC4Q9Y5U2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TSSC4Q9Y5U2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TSSC4Q9Y5U2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.43■□□□□ 0.38
TSSC4Q9Y5U2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.43■□□□□ 0.38
TSSC4Q9Y5U2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.43■□□□□ 0.38
TSSC4Q9Y5U2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TSSC4Q9Y5U2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TSSC4Q9Y5U2 MIR5787-201ENST00000611784 55 ntBASIC17.43■□□□□ 0.38
TSSC4Q9Y5U2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
TSSC4Q9Y5U2 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.43■□□□□ 0.38
TSSC4Q9Y5U2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TSSC4Q9Y5U2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TSSC4Q9Y5U2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TSSC4Q9Y5U2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TSSC4Q9Y5U2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TSSC4Q9Y5U2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TSSC4Q9Y5U2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSSC4Q9Y5U2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSSC4Q9Y5U2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSSC4Q9Y5U2 IRS3P-201ENST00000223076 1006 ntBASIC17.42■□□□□ 0.38
TSSC4Q9Y5U2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.42■□□□□ 0.38
TSSC4Q9Y5U2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.42■□□□□ 0.38
TSSC4Q9Y5U2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.42■□□□□ 0.38
TSSC4Q9Y5U2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSSC4Q9Y5U2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TSSC4Q9Y5U2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TSSC4Q9Y5U2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSSC4Q9Y5U2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSSC4Q9Y5U2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.42■□□□□ 0.38
TSSC4Q9Y5U2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TSSC4Q9Y5U2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSSC4Q9Y5U2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TSSC4Q9Y5U2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TSSC4Q9Y5U2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
TSSC4Q9Y5U2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSSC4Q9Y5U2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.41■□□□□ 0.38
TSSC4Q9Y5U2 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.41■□□□□ 0.38
TSSC4Q9Y5U2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.41■□□□□ 0.38
TSSC4Q9Y5U2 AC026271.2-201ENST00000428091 497 ntBASIC17.41■□□□□ 0.38
TSSC4Q9Y5U2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TSSC4Q9Y5U2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSSC4Q9Y5U2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TSSC4Q9Y5U2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSSC4Q9Y5U2 AC138932.3-201ENST00000567634 1902 ntBASIC17.41■□□□□ 0.38
TSSC4Q9Y5U2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSSC4Q9Y5U2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TSSC4Q9Y5U2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSSC4Q9Y5U2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSSC4Q9Y5U2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSSC4Q9Y5U2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.4■□□□□ 0.38
TSSC4Q9Y5U2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSSC4Q9Y5U2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSSC4Q9Y5U2 LINC00543-201ENST00000567234 1845 ntBASIC17.4■□□□□ 0.38
TSSC4Q9Y5U2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TSSC4Q9Y5U2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TSSC4Q9Y5U2 CLDN5-201ENST00000403084 2357 ntBASIC17.39■□□□□ 0.38
TSSC4Q9Y5U2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TSSC4Q9Y5U2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TSSC4Q9Y5U2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 971.1 ms