Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGA11Q9Y5H2 AC005703.6-201ENST00000623265 1329 ntBASIC21.7■■□□□ 1.06
PCDHGA11Q9Y5H2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
PCDHGA11Q9Y5H2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGA11Q9Y5H2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
PCDHGA11Q9Y5H2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGA11Q9Y5H2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA11Q9Y5H2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA11Q9Y5H2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA11Q9Y5H2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA11Q9Y5H2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.69■■□□□ 1.06
PCDHGA11Q9Y5H2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA11Q9Y5H2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA11Q9Y5H2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PCDHGA11Q9Y5H2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
PCDHGA11Q9Y5H2 AL117328.2-201ENST00000624617 1940 ntBASIC21.68■■□□□ 1.06
PCDHGA11Q9Y5H2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PCDHGA11Q9Y5H2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA11Q9Y5H2 AC239859.2-201ENST00000444165 318 ntBASIC21.68■■□□□ 1.06
PCDHGA11Q9Y5H2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.68■■□□□ 1.06
PCDHGA11Q9Y5H2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
PCDHGA11Q9Y5H2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.68■■□□□ 1.06
PCDHGA11Q9Y5H2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHGA11Q9Y5H2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA11Q9Y5H2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA11Q9Y5H2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA11Q9Y5H2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.68■■□□□ 1.06
PCDHGA11Q9Y5H2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHGA11Q9Y5H2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHGA11Q9Y5H2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGA11Q9Y5H2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGA11Q9Y5H2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PCDHGA11Q9Y5H2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
PCDHGA11Q9Y5H2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHGA11Q9Y5H2 AL451085.2-201ENST00000605085 799 ntBASIC21.67■■□□□ 1.06
PCDHGA11Q9Y5H2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGA11Q9Y5H2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGA11Q9Y5H2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGA11Q9Y5H2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGA11Q9Y5H2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGA11Q9Y5H2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
PCDHGA11Q9Y5H2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHGA11Q9Y5H2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PCDHGA11Q9Y5H2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PCDHGA11Q9Y5H2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGA11Q9Y5H2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGA11Q9Y5H2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PCDHGA11Q9Y5H2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PCDHGA11Q9Y5H2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHGA11Q9Y5H2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHGA11Q9Y5H2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA11Q9Y5H2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA11Q9Y5H2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA11Q9Y5H2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA11Q9Y5H2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA11Q9Y5H2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
PCDHGA11Q9Y5H2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA11Q9Y5H2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHGA11Q9Y5H2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
PCDHGA11Q9Y5H2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
PCDHGA11Q9Y5H2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.64■■□□□ 1.06
PCDHGA11Q9Y5H2 AC079630.1-202ENST00000618127 1840 ntBASIC21.64■■□□□ 1.06
PCDHGA11Q9Y5H2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHGA11Q9Y5H2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGA11Q9Y5H2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHGA11Q9Y5H2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGA11Q9Y5H2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHGA11Q9Y5H2 MTDHP2-201ENST00000601468 714 ntBASIC21.64■■□□□ 1.05
PCDHGA11Q9Y5H2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDHGA11Q9Y5H2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDHGA11Q9Y5H2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PCDHGA11Q9Y5H2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA11Q9Y5H2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PCDHGA11Q9Y5H2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
PCDHGA11Q9Y5H2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA11Q9Y5H2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA11Q9Y5H2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PCDHGA11Q9Y5H2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
PCDHGA11Q9Y5H2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PCDHGA11Q9Y5H2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA11Q9Y5H2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PCDHGA11Q9Y5H2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA11Q9Y5H2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA11Q9Y5H2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA11Q9Y5H2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PCDHGA11Q9Y5H2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHGA11Q9Y5H2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA11Q9Y5H2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHGA11Q9Y5H2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.62■■□□□ 1.05
PCDHGA11Q9Y5H2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
PCDHGA11Q9Y5H2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHGA11Q9Y5H2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHGA11Q9Y5H2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA11Q9Y5H2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA11Q9Y5H2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHGA11Q9Y5H2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA11Q9Y5H2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGA11Q9Y5H2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGA11Q9Y5H2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGA11Q9Y5H2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms