Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGC4Q9Y5F7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGC4Q9Y5F7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGC4Q9Y5F7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGC4Q9Y5F7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.62■■□□□ 1.21
PCDHGC4Q9Y5F7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGC4Q9Y5F7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDHGC4Q9Y5F7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGC4Q9Y5F7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGC4Q9Y5F7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGC4Q9Y5F7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGC4Q9Y5F7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGC4Q9Y5F7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGC4Q9Y5F7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGC4Q9Y5F7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.61■■□□□ 1.21
PCDHGC4Q9Y5F7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGC4Q9Y5F7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDHGC4Q9Y5F7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGC4Q9Y5F7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.61■■□□□ 1.21
PCDHGC4Q9Y5F7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGC4Q9Y5F7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGC4Q9Y5F7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.61■■□□□ 1.21
PCDHGC4Q9Y5F7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGC4Q9Y5F7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGC4Q9Y5F7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGC4Q9Y5F7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDHGC4Q9Y5F7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGC4Q9Y5F7 AC006455.2-201ENST00000429931 906 ntBASIC22.6■■□□□ 1.21
PCDHGC4Q9Y5F7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.6■■□□□ 1.21
PCDHGC4Q9Y5F7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.6■■□□□ 1.21
PCDHGC4Q9Y5F7 AC241377.3-202ENST00000626088 1088 ntBASIC22.6■■□□□ 1.21
PCDHGC4Q9Y5F7 AC241585.3-202ENST00000628937 1088 ntBASIC22.6■■□□□ 1.21
PCDHGC4Q9Y5F7 AC245100.8-202ENST00000629247 1058 ntBASIC22.6■■□□□ 1.21
PCDHGC4Q9Y5F7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
PCDHGC4Q9Y5F7 AL353803.4-201ENST00000565882 1934 ntBASIC22.6■■□□□ 1.21
PCDHGC4Q9Y5F7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGC4Q9Y5F7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGC4Q9Y5F7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGC4Q9Y5F7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGC4Q9Y5F7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGC4Q9Y5F7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
PCDHGC4Q9Y5F7 AC092068.2-201ENST00000590491 1708 ntBASIC22.6■■□□□ 1.21
PCDHGC4Q9Y5F7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDHGC4Q9Y5F7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
PCDHGC4Q9Y5F7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGC4Q9Y5F7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.59■■□□□ 1.21
PCDHGC4Q9Y5F7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGC4Q9Y5F7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGC4Q9Y5F7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.59■■□□□ 1.21
PCDHGC4Q9Y5F7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDHGC4Q9Y5F7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
PCDHGC4Q9Y5F7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGC4Q9Y5F7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
PCDHGC4Q9Y5F7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.59■■□□□ 1.21
PCDHGC4Q9Y5F7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGC4Q9Y5F7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.59■■□□□ 1.21
PCDHGC4Q9Y5F7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
PCDHGC4Q9Y5F7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDHGC4Q9Y5F7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGC4Q9Y5F7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
PCDHGC4Q9Y5F7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGC4Q9Y5F7 FP325331.1-202ENST00000623531 1380 ntBASIC22.59■■□□□ 1.21
PCDHGC4Q9Y5F7 LINC01529-204ENST00000636474 1715 ntBASIC22.59■■□□□ 1.21
PCDHGC4Q9Y5F7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.58■■□□□ 1.21
PCDHGC4Q9Y5F7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
PCDHGC4Q9Y5F7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGC4Q9Y5F7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGC4Q9Y5F7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGC4Q9Y5F7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.58■■□□□ 1.21
PCDHGC4Q9Y5F7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDHGC4Q9Y5F7 AC009086.3-201ENST00000623486 1008 ntBASIC22.58■■□□□ 1.21
PCDHGC4Q9Y5F7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PCDHGC4Q9Y5F7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PCDHGC4Q9Y5F7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
PCDHGC4Q9Y5F7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
PCDHGC4Q9Y5F7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGC4Q9Y5F7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGC4Q9Y5F7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHGC4Q9Y5F7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGC4Q9Y5F7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGC4Q9Y5F7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
PCDHGC4Q9Y5F7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGC4Q9Y5F7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PCDHGC4Q9Y5F7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGC4Q9Y5F7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGC4Q9Y5F7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGC4Q9Y5F7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.56■■□□□ 1.2
PCDHGC4Q9Y5F7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
PCDHGC4Q9Y5F7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDHGC4Q9Y5F7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHGC4Q9Y5F7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGC4Q9Y5F7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
PCDHGC4Q9Y5F7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGC4Q9Y5F7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGC4Q9Y5F7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGC4Q9Y5F7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGC4Q9Y5F7 AC096631.2-201ENST00000436136 790 ntBASIC22.55■■□□□ 1.2
PCDHGC4Q9Y5F7 DUX4L4-201ENST00000566884 1269 ntBASIC22.55■■□□□ 1.2
PCDHGC4Q9Y5F7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHGC4Q9Y5F7 AC092171.4-201ENST00000609130 632 ntBASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms