Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF11Q9Y3C5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF11Q9Y3C5 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF11Q9Y3C5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.82■■□□□ 1.08
RNF11Q9Y3C5 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.82■■□□□ 1.08
RNF11Q9Y3C5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF11Q9Y3C5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
RNF11Q9Y3C5 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF11Q9Y3C5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF11Q9Y3C5 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF11Q9Y3C5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF11Q9Y3C5 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RNF11Q9Y3C5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF11Q9Y3C5 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RNF11Q9Y3C5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF11Q9Y3C5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF11Q9Y3C5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF11Q9Y3C5 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.8■■□□□ 1.08
RNF11Q9Y3C5 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF11Q9Y3C5 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF11Q9Y3C5 AC021242.3-201ENST00000607598 1377 ntBASIC21.8■■□□□ 1.08
RNF11Q9Y3C5 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.8■■□□□ 1.08
RNF11Q9Y3C5 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.8■■□□□ 1.08
RNF11Q9Y3C5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF11Q9Y3C5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RNF11Q9Y3C5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.8■■□□□ 1.08
RNF11Q9Y3C5 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF11Q9Y3C5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
RNF11Q9Y3C5 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.8■■□□□ 1.08
RNF11Q9Y3C5 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF11Q9Y3C5 AC079630.1-202ENST00000618127 1840 ntBASIC21.8■■□□□ 1.08
RNF11Q9Y3C5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RNF11Q9Y3C5 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.79■■□□□ 1.08
RNF11Q9Y3C5 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.79■■□□□ 1.08
RNF11Q9Y3C5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF11Q9Y3C5 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF11Q9Y3C5 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF11Q9Y3C5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF11Q9Y3C5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.79■■□□□ 1.08
RNF11Q9Y3C5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.79■■□□□ 1.08
RNF11Q9Y3C5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF11Q9Y3C5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF11Q9Y3C5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF11Q9Y3C5 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF11Q9Y3C5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF11Q9Y3C5 BX664725.1-201ENST00000438252 379 ntBASIC21.78■■□□□ 1.08
RNF11Q9Y3C5 RARRES2P1-201ENST00000474487 481 ntBASIC21.78■■□□□ 1.08
RNF11Q9Y3C5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF11Q9Y3C5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF11Q9Y3C5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.78■■□□□ 1.08
RNF11Q9Y3C5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.78■■□□□ 1.08
RNF11Q9Y3C5 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF11Q9Y3C5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF11Q9Y3C5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF11Q9Y3C5 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF11Q9Y3C5 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF11Q9Y3C5 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF11Q9Y3C5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF11Q9Y3C5 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RNF11Q9Y3C5 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF11Q9Y3C5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
RNF11Q9Y3C5 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.77■■□□□ 1.08
RNF11Q9Y3C5 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF11Q9Y3C5 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF11Q9Y3C5 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF11Q9Y3C5 AL024507.2-201ENST00000606070 2574 ntBASIC21.77■■□□□ 1.08
RNF11Q9Y3C5 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF11Q9Y3C5 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF11Q9Y3C5 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF11Q9Y3C5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF11Q9Y3C5 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RNF11Q9Y3C5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF11Q9Y3C5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RNF11Q9Y3C5 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
RNF11Q9Y3C5 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.76■■□□□ 1.07
RNF11Q9Y3C5 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
RNF11Q9Y3C5 AC233723.2-201ENST00000623798 2106 ntBASIC21.76■■□□□ 1.07
RNF11Q9Y3C5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.76■■□□□ 1.07
RNF11Q9Y3C5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.76■■□□□ 1.07
RNF11Q9Y3C5 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.76■■□□□ 1.07
RNF11Q9Y3C5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF11Q9Y3C5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF11Q9Y3C5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.76■■□□□ 1.07
RNF11Q9Y3C5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF11Q9Y3C5 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF11Q9Y3C5 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF11Q9Y3C5 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF11Q9Y3C5 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
RNF11Q9Y3C5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.75■■□□□ 1.07
RNF11Q9Y3C5 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
RNF11Q9Y3C5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF11Q9Y3C5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RNF11Q9Y3C5 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
RNF11Q9Y3C5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF11Q9Y3C5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF11Q9Y3C5 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
RNF11Q9Y3C5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF11Q9Y3C5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF11Q9Y3C5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF11Q9Y3C5 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms