Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHA6Q9UN73 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.73■■□□□ 1.71
PCDHA6Q9UN73 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHA6Q9UN73 AC092068.2-201ENST00000590491 1708 ntBASIC25.72■■□□□ 1.71
PCDHA6Q9UN73 ASB1-202ENST00000409297 878 ntTSL 5 BASIC25.72■■□□□ 1.71
PCDHA6Q9UN73 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.72■■□□□ 1.71
PCDHA6Q9UN73 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHA6Q9UN73 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHA6Q9UN73 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHA6Q9UN73 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHA6Q9UN73 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHA6Q9UN73 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.71■■□□□ 1.71
PCDHA6Q9UN73 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHA6Q9UN73 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHA6Q9UN73 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.71
PCDHA6Q9UN73 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.7■■□□□ 1.71
PCDHA6Q9UN73 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHA6Q9UN73 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.7■■□□□ 1.7
PCDHA6Q9UN73 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHA6Q9UN73 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
PCDHA6Q9UN73 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHA6Q9UN73 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHA6Q9UN73 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHA6Q9UN73 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
PCDHA6Q9UN73 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHA6Q9UN73 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHA6Q9UN73 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC25.69■■□□□ 1.7
PCDHA6Q9UN73 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHA6Q9UN73 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
PCDHA6Q9UN73 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHA6Q9UN73 AC241377.3-202ENST00000626088 1088 ntBASIC25.69■■□□□ 1.7
PCDHA6Q9UN73 AC241585.3-202ENST00000628937 1088 ntBASIC25.69■■□□□ 1.7
PCDHA6Q9UN73 AC245100.8-202ENST00000629247 1058 ntBASIC25.69■■□□□ 1.7
PCDHA6Q9UN73 AC144652.1-201ENST00000609974 1624 ntBASIC25.69■■□□□ 1.7
PCDHA6Q9UN73 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHA6Q9UN73 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHA6Q9UN73 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHA6Q9UN73 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHA6Q9UN73 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHA6Q9UN73 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHA6Q9UN73 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
PCDHA6Q9UN73 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHA6Q9UN73 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHA6Q9UN73 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.68■■□□□ 1.7
PCDHA6Q9UN73 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHA6Q9UN73 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.68■■□□□ 1.7
PCDHA6Q9UN73 AC092171.4-201ENST00000609130 632 ntBASIC25.68■■□□□ 1.7
PCDHA6Q9UN73 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.68■■□□□ 1.7
PCDHA6Q9UN73 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
PCDHA6Q9UN73 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC25.68■■□□□ 1.7
PCDHA6Q9UN73 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHA6Q9UN73 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
PCDHA6Q9UN73 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA6Q9UN73 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA6Q9UN73 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.67■■□□□ 1.7
PCDHA6Q9UN73 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.67■■□□□ 1.7
PCDHA6Q9UN73 AC006455.2-201ENST00000429931 906 ntBASIC25.67■■□□□ 1.7
PCDHA6Q9UN73 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.67■■□□□ 1.7
PCDHA6Q9UN73 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA6Q9UN73 DUX4L19-201ENST00000557448 1267 ntBASIC25.67■■□□□ 1.7
PCDHA6Q9UN73 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA6Q9UN73 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.67■■□□□ 1.7
PCDHA6Q9UN73 AL136162.1-201ENST00000607711 1078 ntBASIC25.67■■□□□ 1.7
PCDHA6Q9UN73 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA6Q9UN73 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA6Q9UN73 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA6Q9UN73 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA6Q9UN73 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.66■■□□□ 1.7
PCDHA6Q9UN73 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA6Q9UN73 SYT6-210ENST00000641643 1587 ntBASIC25.66■■□□□ 1.7
PCDHA6Q9UN73 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA6Q9UN73 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA6Q9UN73 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA6Q9UN73 MIR638-201ENST00000385237 100 ntBASIC25.66■■□□□ 1.7
PCDHA6Q9UN73 PBX2P1-201ENST00000493219 1291 ntBASIC25.66■■□□□ 1.7
PCDHA6Q9UN73 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
PCDHA6Q9UN73 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA6Q9UN73 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA6Q9UN73 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA6Q9UN73 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHA6Q9UN73 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.65■■□□□ 1.7
PCDHA6Q9UN73 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHA6Q9UN73 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHA6Q9UN73 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.65■■□□□ 1.7
PCDHA6Q9UN73 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
PCDHA6Q9UN73 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHA6Q9UN73 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHA6Q9UN73 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.65■■□□□ 1.7
PCDHA6Q9UN73 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
PCDHA6Q9UN73 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHA6Q9UN73 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHA6Q9UN73 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHA6Q9UN73 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC25.64■■□□□ 1.7
PCDHA6Q9UN73 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.64■■□□□ 1.7
PCDHA6Q9UN73 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHA6Q9UN73 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.64■■□□□ 1.7
PCDHA6Q9UN73 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHA6Q9UN73 SERBP1P1-201ENST00000396021 1160 ntBASIC25.64■■□□□ 1.7
PCDHA6Q9UN73 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
PCDHA6Q9UN73 AC106739.1-201ENST00000617035 715 ntBASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms