Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
UBQLN1Q9UMX0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
UBQLN1Q9UMX0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
UBQLN1Q9UMX0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
UBQLN1Q9UMX0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.13■■□□□ 1.45
UBQLN1Q9UMX0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
UBQLN1Q9UMX0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
UBQLN1Q9UMX0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
UBQLN1Q9UMX0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
UBQLN1Q9UMX0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
UBQLN1Q9UMX0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
UBQLN1Q9UMX0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
UBQLN1Q9UMX0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.12■■□□□ 1.45
UBQLN1Q9UMX0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.12■■□□□ 1.45
UBQLN1Q9UMX0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
UBQLN1Q9UMX0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.12■■□□□ 1.45
UBQLN1Q9UMX0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
UBQLN1Q9UMX0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
UBQLN1Q9UMX0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
UBQLN1Q9UMX0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC24.11■■□□□ 1.45
UBQLN1Q9UMX0 AP001330.3-201ENST00000520123 633 ntBASIC24.11■■□□□ 1.45
UBQLN1Q9UMX0 AF213884.3-201ENST00000563833 479 ntBASIC24.11■■□□□ 1.45
UBQLN1Q9UMX0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.11■■□□□ 1.45
UBQLN1Q9UMX0 AL499627.2-201ENST00000606283 725 ntBASIC24.11■■□□□ 1.45
UBQLN1Q9UMX0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
UBQLN1Q9UMX0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.11■■□□□ 1.45
UBQLN1Q9UMX0 AC079630.1-202ENST00000618127 1840 ntBASIC24.11■■□□□ 1.45
UBQLN1Q9UMX0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
UBQLN1Q9UMX0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
UBQLN1Q9UMX0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
UBQLN1Q9UMX0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
UBQLN1Q9UMX0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
UBQLN1Q9UMX0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.1■■□□□ 1.45
UBQLN1Q9UMX0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
UBQLN1Q9UMX0 MIR939-201ENST00000401314 82 ntBASIC24.1■■□□□ 1.45
UBQLN1Q9UMX0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC24.1■■□□□ 1.45
UBQLN1Q9UMX0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.1■■□□□ 1.45
UBQLN1Q9UMX0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.1■■□□□ 1.45
UBQLN1Q9UMX0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.1■■□□□ 1.45
UBQLN1Q9UMX0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.1■■□□□ 1.45
UBQLN1Q9UMX0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.1■■□□□ 1.45
UBQLN1Q9UMX0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
UBQLN1Q9UMX0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
UBQLN1Q9UMX0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.1■■□□□ 1.45
UBQLN1Q9UMX0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
UBQLN1Q9UMX0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
UBQLN1Q9UMX0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
UBQLN1Q9UMX0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
UBQLN1Q9UMX0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.09■■□□□ 1.45
UBQLN1Q9UMX0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
UBQLN1Q9UMX0 AL136967.2-201ENST00000623968 743 ntBASIC24.09■■□□□ 1.45
UBQLN1Q9UMX0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
UBQLN1Q9UMX0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
UBQLN1Q9UMX0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
UBQLN1Q9UMX0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.09■■□□□ 1.45
UBQLN1Q9UMX0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.08■■□□□ 1.45
UBQLN1Q9UMX0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
UBQLN1Q9UMX0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
UBQLN1Q9UMX0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
UBQLN1Q9UMX0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC24.08■■□□□ 1.45
UBQLN1Q9UMX0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
UBQLN1Q9UMX0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.08■■□□□ 1.44
UBQLN1Q9UMX0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.44
UBQLN1Q9UMX0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
UBQLN1Q9UMX0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
UBQLN1Q9UMX0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
UBQLN1Q9UMX0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
UBQLN1Q9UMX0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.07■■□□□ 1.44
UBQLN1Q9UMX0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
UBQLN1Q9UMX0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.07■■□□□ 1.44
UBQLN1Q9UMX0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
UBQLN1Q9UMX0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
UBQLN1Q9UMX0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
UBQLN1Q9UMX0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
UBQLN1Q9UMX0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
UBQLN1Q9UMX0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
UBQLN1Q9UMX0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
UBQLN1Q9UMX0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
UBQLN1Q9UMX0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.06■■□□□ 1.44
UBQLN1Q9UMX0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.06■■□□□ 1.44
UBQLN1Q9UMX0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
UBQLN1Q9UMX0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
UBQLN1Q9UMX0 AC133637.1-201ENST00000624115 1537 ntBASIC24.06■■□□□ 1.44
UBQLN1Q9UMX0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.06■■□□□ 1.44
UBQLN1Q9UMX0 AC091305.1-201ENST00000479476 895 ntBASIC24.06■■□□□ 1.44
UBQLN1Q9UMX0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
UBQLN1Q9UMX0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
UBQLN1Q9UMX0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
UBQLN1Q9UMX0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
UBQLN1Q9UMX0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
UBQLN1Q9UMX0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.05■■□□□ 1.44
UBQLN1Q9UMX0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.05■■□□□ 1.44
UBQLN1Q9UMX0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
UBQLN1Q9UMX0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.05■■□□□ 1.44
UBQLN1Q9UMX0 AC027682.1-201ENST00000562846 899 ntBASIC24.05■■□□□ 1.44
UBQLN1Q9UMX0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.05■■□□□ 1.44
UBQLN1Q9UMX0 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.05■■□□□ 1.44
UBQLN1Q9UMX0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
UBQLN1Q9UMX0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
UBQLN1Q9UMX0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms