Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.18■□□□□ 0.34
NOTCH3Q9UM47 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.18■□□□□ 0.34
NOTCH3Q9UM47 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NOTCH3Q9UM47 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.17■□□□□ 0.34
NOTCH3Q9UM47 SLC47A1P1-202ENST00000449666 945 ntBASIC17.17■□□□□ 0.34
NOTCH3Q9UM47 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
NOTCH3Q9UM47 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NOTCH3Q9UM47 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NOTCH3Q9UM47 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.17■□□□□ 0.34
NOTCH3Q9UM47 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NOTCH3Q9UM47 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
NOTCH3Q9UM47 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NOTCH3Q9UM47 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.16■□□□□ 0.34
NOTCH3Q9UM47 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NOTCH3Q9UM47 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NOTCH3Q9UM47 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.16■□□□□ 0.34
NOTCH3Q9UM47 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NOTCH3Q9UM47 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.16■□□□□ 0.34
NOTCH3Q9UM47 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NOTCH3Q9UM47 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NOTCH3Q9UM47 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NOTCH3Q9UM47 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NOTCH3Q9UM47 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NOTCH3Q9UM47 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.15■□□□□ 0.34
NOTCH3Q9UM47 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NOTCH3Q9UM47 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NOTCH3Q9UM47 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NOTCH3Q9UM47 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NOTCH3Q9UM47 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NOTCH3Q9UM47 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.15■□□□□ 0.34
NOTCH3Q9UM47 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NOTCH3Q9UM47 MIR572-201ENST00000384983 95 ntBASIC17.14■□□□□ 0.33
NOTCH3Q9UM47 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
NOTCH3Q9UM47 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NOTCH3Q9UM47 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NOTCH3Q9UM47 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.14■□□□□ 0.33
NOTCH3Q9UM47 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.14■□□□□ 0.33
NOTCH3Q9UM47 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NOTCH3Q9UM47 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.14■□□□□ 0.33
NOTCH3Q9UM47 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NOTCH3Q9UM47 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
NOTCH3Q9UM47 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.14■□□□□ 0.33
NOTCH3Q9UM47 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.14■□□□□ 0.33
NOTCH3Q9UM47 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NOTCH3Q9UM47 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NOTCH3Q9UM47 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH3Q9UM47 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.13■□□□□ 0.33
NOTCH3Q9UM47 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH3Q9UM47 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH3Q9UM47 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.13■□□□□ 0.33
NOTCH3Q9UM47 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.13■□□□□ 0.33
NOTCH3Q9UM47 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH3Q9UM47 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.13■□□□□ 0.33
NOTCH3Q9UM47 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NOTCH3Q9UM47 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
NOTCH3Q9UM47 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NOTCH3Q9UM47 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.13■□□□□ 0.33
NOTCH3Q9UM47 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH3Q9UM47 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NOTCH3Q9UM47 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.13■□□□□ 0.33
NOTCH3Q9UM47 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.13■□□□□ 0.33
NOTCH3Q9UM47 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.13■□□□□ 0.33
NOTCH3Q9UM47 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.13■□□□□ 0.33
NOTCH3Q9UM47 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NOTCH3Q9UM47 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.12■□□□□ 0.33
NOTCH3Q9UM47 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NOTCH3Q9UM47 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NOTCH3Q9UM47 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NOTCH3Q9UM47 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.12■□□□□ 0.33
NOTCH3Q9UM47 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.12■□□□□ 0.33
NOTCH3Q9UM47 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NOTCH3Q9UM47 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NOTCH3Q9UM47 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NOTCH3Q9UM47 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.12■□□□□ 0.33
NOTCH3Q9UM47 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.12■□□□□ 0.33
NOTCH3Q9UM47 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NOTCH3Q9UM47 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NOTCH3Q9UM47 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NOTCH3Q9UM47 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NOTCH3Q9UM47 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.11■□□□□ 0.33
NOTCH3Q9UM47 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NOTCH3Q9UM47 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NOTCH3Q9UM47 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NOTCH3Q9UM47 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NOTCH3Q9UM47 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.11■□□□□ 0.33
NOTCH3Q9UM47 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.11■□□□□ 0.33
NOTCH3Q9UM47 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NOTCH3Q9UM47 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NOTCH3Q9UM47 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NOTCH3Q9UM47 AC126544.1-201ENST00000580842 1059 ntBASIC17.1■□□□□ 0.33
NOTCH3Q9UM47 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
NOTCH3Q9UM47 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.1■□□□□ 0.33
NOTCH3Q9UM47 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NOTCH3Q9UM47 TSPY26P-201ENST00000476365 1326 ntBASIC17.1■□□□□ 0.33
NOTCH3Q9UM47 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NOTCH3Q9UM47 AC091060.1-201ENST00000623524 1766 ntBASIC17.1■□□□□ 0.33
NOTCH3Q9UM47 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.1■□□□□ 0.33
NOTCH3Q9UM47 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.1■□□□□ 0.33
NOTCH3Q9UM47 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NOTCH3Q9UM47 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms