Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMCC3Q9ULS5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.69■□□□□ 0.9
TMCC3Q9ULS5 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMCC3Q9ULS5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMCC3Q9ULS5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMCC3Q9ULS5 ESRRAP2-201ENST00000418437 1549 ntBASIC20.68■□□□□ 0.9
TMCC3Q9ULS5 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMCC3Q9ULS5 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMCC3Q9ULS5 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TMCC3Q9ULS5 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMCC3Q9ULS5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMCC3Q9ULS5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.68■□□□□ 0.9
TMCC3Q9ULS5 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMCC3Q9ULS5 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMCC3Q9ULS5 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.68■□□□□ 0.9
TMCC3Q9ULS5 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TMCC3Q9ULS5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMCC3Q9ULS5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMCC3Q9ULS5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMCC3Q9ULS5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMCC3Q9ULS5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMCC3Q9ULS5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.67■□□□□ 0.9
TMCC3Q9ULS5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMCC3Q9ULS5 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TMCC3Q9ULS5 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMCC3Q9ULS5 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMCC3Q9ULS5 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMCC3Q9ULS5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.67■□□□□ 0.9
TMCC3Q9ULS5 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMCC3Q9ULS5 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TMCC3Q9ULS5 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TMCC3Q9ULS5 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TMCC3Q9ULS5 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMCC3Q9ULS5 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMCC3Q9ULS5 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMCC3Q9ULS5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMCC3Q9ULS5 RARRES2P2-201ENST00000394842 485 ntBASIC20.66■□□□□ 0.9
TMCC3Q9ULS5 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMCC3Q9ULS5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TMCC3Q9ULS5 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMCC3Q9ULS5 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMCC3Q9ULS5 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.66■□□□□ 0.9
TMCC3Q9ULS5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMCC3Q9ULS5 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMCC3Q9ULS5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TMCC3Q9ULS5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMCC3Q9ULS5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TMCC3Q9ULS5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TMCC3Q9ULS5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TMCC3Q9ULS5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMCC3Q9ULS5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TMCC3Q9ULS5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.65■□□□□ 0.9
TMCC3Q9ULS5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMCC3Q9ULS5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMCC3Q9ULS5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.65■□□□□ 0.9
TMCC3Q9ULS5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMCC3Q9ULS5 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.65■□□□□ 0.9
TMCC3Q9ULS5 AC139795.1-202ENST00000500444 432 ntBASIC20.65■□□□□ 0.9
TMCC3Q9ULS5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.65■□□□□ 0.9
TMCC3Q9ULS5 U85056.1-201ENST00000616429 682 ntBASIC20.65■□□□□ 0.9
TMCC3Q9ULS5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMCC3Q9ULS5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
TMCC3Q9ULS5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMCC3Q9ULS5 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TMCC3Q9ULS5 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TMCC3Q9ULS5 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMCC3Q9ULS5 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMCC3Q9ULS5 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMCC3Q9ULS5 AC019171.1-201ENST00000601251 1056 ntBASIC20.64■□□□□ 0.89
TMCC3Q9ULS5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TMCC3Q9ULS5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.64■□□□□ 0.89
TMCC3Q9ULS5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMCC3Q9ULS5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMCC3Q9ULS5 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
TMCC3Q9ULS5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMCC3Q9ULS5 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.63■□□□□ 0.89
TMCC3Q9ULS5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMCC3Q9ULS5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TMCC3Q9ULS5 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TMCC3Q9ULS5 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.63■□□□□ 0.89
TMCC3Q9ULS5 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.63■□□□□ 0.89
TMCC3Q9ULS5 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMCC3Q9ULS5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMCC3Q9ULS5 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.62■□□□□ 0.89
TMCC3Q9ULS5 AC079630.1-202ENST00000618127 1840 ntBASIC20.62■□□□□ 0.89
TMCC3Q9ULS5 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMCC3Q9ULS5 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.62■□□□□ 0.89
TMCC3Q9ULS5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMCC3Q9ULS5 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMCC3Q9ULS5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TMCC3Q9ULS5 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TMCC3Q9ULS5 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMCC3Q9ULS5 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMCC3Q9ULS5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.62■□□□□ 0.89
TMCC3Q9ULS5 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMCC3Q9ULS5 AC242852.2-201ENST00000615738 1807 ntBASIC20.62■□□□□ 0.89
TMCC3Q9ULS5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
TMCC3Q9ULS5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMCC3Q9ULS5 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMCC3Q9ULS5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms