Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 AC012676.1-201ENST00000574705 1949 ntBASIC18.52■□□□□ 0.56
CALYQ9NYX4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CALYQ9NYX4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CALYQ9NYX4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.52■□□□□ 0.55
CALYQ9NYX4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CALYQ9NYX4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CALYQ9NYX4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.51■□□□□ 0.55
CALYQ9NYX4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CALYQ9NYX4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.51■□□□□ 0.55
CALYQ9NYX4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.51■□□□□ 0.55
CALYQ9NYX4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.51■□□□□ 0.55
CALYQ9NYX4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CALYQ9NYX4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
CALYQ9NYX4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.51■□□□□ 0.55
CALYQ9NYX4 AC133561.1-201ENST00000568600 2415 ntBASIC18.51■□□□□ 0.55
CALYQ9NYX4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.51■□□□□ 0.55
CALYQ9NYX4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.51■□□□□ 0.55
CALYQ9NYX4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CALYQ9NYX4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALYQ9NYX4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CALYQ9NYX4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CALYQ9NYX4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALYQ9NYX4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALYQ9NYX4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.5■□□□□ 0.55
CALYQ9NYX4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALYQ9NYX4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CALYQ9NYX4 AC144652.1-201ENST00000609974 1624 ntBASIC18.5■□□□□ 0.55
CALYQ9NYX4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.5■□□□□ 0.55
CALYQ9NYX4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CALYQ9NYX4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CALYQ9NYX4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CALYQ9NYX4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALYQ9NYX4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALYQ9NYX4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CALYQ9NYX4 AL353803.4-201ENST00000565882 1934 ntBASIC18.49■□□□□ 0.55
CALYQ9NYX4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALYQ9NYX4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CALYQ9NYX4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CALYQ9NYX4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CALYQ9NYX4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.49■□□□□ 0.55
CALYQ9NYX4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.49■□□□□ 0.55
CALYQ9NYX4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.49■□□□□ 0.55
CALYQ9NYX4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALYQ9NYX4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CALYQ9NYX4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALYQ9NYX4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALYQ9NYX4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.48■□□□□ 0.55
CALYQ9NYX4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALYQ9NYX4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALYQ9NYX4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALYQ9NYX4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CALYQ9NYX4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALYQ9NYX4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CALYQ9NYX4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
CALYQ9NYX4 KRT16P3-201ENST00000439127 1283 ntBASIC18.48■□□□□ 0.55
CALYQ9NYX4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.48■□□□□ 0.55
CALYQ9NYX4 MIR6724-1-201ENST00000616420 92 ntBASIC18.48■□□□□ 0.55
CALYQ9NYX4 MIR6724-2-201ENST00000616483 92 ntBASIC18.48■□□□□ 0.55
CALYQ9NYX4 MIR6724-4-201ENST00000617390 92 ntBASIC18.48■□□□□ 0.55
CALYQ9NYX4 MIR6724-3-201ENST00000622482 92 ntBASIC18.48■□□□□ 0.55
CALYQ9NYX4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALYQ9NYX4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALYQ9NYX4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.48■□□□□ 0.55
CALYQ9NYX4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CALYQ9NYX4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.47■□□□□ 0.55
CALYQ9NYX4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALYQ9NYX4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALYQ9NYX4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALYQ9NYX4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALYQ9NYX4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.47■□□□□ 0.55
CALYQ9NYX4 GUSBP5-201ENST00000418136 578 ntBASIC18.47■□□□□ 0.55
CALYQ9NYX4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CALYQ9NYX4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.47■□□□□ 0.55
CALYQ9NYX4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CALYQ9NYX4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.47■□□□□ 0.55
CALYQ9NYX4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CALYQ9NYX4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CALYQ9NYX4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.46■□□□□ 0.55
CALYQ9NYX4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.46■□□□□ 0.55
CALYQ9NYX4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.46■□□□□ 0.55
CALYQ9NYX4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CALYQ9NYX4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CALYQ9NYX4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
CALYQ9NYX4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CALYQ9NYX4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CALYQ9NYX4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.46■□□□□ 0.55
CALYQ9NYX4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CALYQ9NYX4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CALYQ9NYX4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CALYQ9NYX4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CALYQ9NYX4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.45■□□□□ 0.54
CALYQ9NYX4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.45■□□□□ 0.54
CALYQ9NYX4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.45■□□□□ 0.54
CALYQ9NYX4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CALYQ9NYX4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CALYQ9NYX4 AC009102.2-201ENST00000606772 1639 ntBASIC18.45■□□□□ 0.54
CALYQ9NYX4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CALYQ9NYX4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CALYQ9NYX4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CALYQ9NYX4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms