Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC27.4■■□□□ 1.98
ECHDC1Q9NTX5 FP325331.1-202ENST00000623531 1380 ntBASIC27.39■■□□□ 1.98
ECHDC1Q9NTX5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
ECHDC1Q9NTX5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
ECHDC1Q9NTX5 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC27.39■■□□□ 1.98
ECHDC1Q9NTX5 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
ECHDC1Q9NTX5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC27.39■■□□□ 1.98
ECHDC1Q9NTX5 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC27.39■■□□□ 1.98
ECHDC1Q9NTX5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC27.39■■□□□ 1.98
ECHDC1Q9NTX5 DUSP8P3-201ENST00000399571 1760 ntBASIC27.39■■□□□ 1.98
ECHDC1Q9NTX5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC27.39■■□□□ 1.97
ECHDC1Q9NTX5 AL353803.4-201ENST00000565882 1934 ntBASIC27.39■■□□□ 1.97
ECHDC1Q9NTX5 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.97
ECHDC1Q9NTX5 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ECHDC1Q9NTX5 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
ECHDC1Q9NTX5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
ECHDC1Q9NTX5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
ECHDC1Q9NTX5 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ECHDC1Q9NTX5 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC27.38■■□□□ 1.97
ECHDC1Q9NTX5 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
ECHDC1Q9NTX5 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ECHDC1Q9NTX5 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC27.37■■□□□ 1.97
ECHDC1Q9NTX5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC27.37■■□□□ 1.97
ECHDC1Q9NTX5 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ECHDC1Q9NTX5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC27.37■■□□□ 1.97
ECHDC1Q9NTX5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
ECHDC1Q9NTX5 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
ECHDC1Q9NTX5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC27.37■■□□□ 1.97
ECHDC1Q9NTX5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
ECHDC1Q9NTX5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ECHDC1Q9NTX5 LINC01529-204ENST00000636474 1715 ntBASIC27.36■■□□□ 1.97
ECHDC1Q9NTX5 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
ECHDC1Q9NTX5 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC27.36■■□□□ 1.97
ECHDC1Q9NTX5 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
ECHDC1Q9NTX5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ECHDC1Q9NTX5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
ECHDC1Q9NTX5 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
ECHDC1Q9NTX5 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ECHDC1Q9NTX5 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
ECHDC1Q9NTX5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ECHDC1Q9NTX5 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ECHDC1Q9NTX5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ECHDC1Q9NTX5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
ECHDC1Q9NTX5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC27.35■■□□□ 1.97
ECHDC1Q9NTX5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ECHDC1Q9NTX5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC27.35■■□□□ 1.97
ECHDC1Q9NTX5 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC27.35■■□□□ 1.97
ECHDC1Q9NTX5 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
ECHDC1Q9NTX5 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC27.35■■□□□ 1.97
ECHDC1Q9NTX5 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ECHDC1Q9NTX5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ECHDC1Q9NTX5 SRD5A1P1-201ENST00000442297 786 ntBASIC27.34■■□□□ 1.97
ECHDC1Q9NTX5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ECHDC1Q9NTX5 DUX4L4-201ENST00000566884 1269 ntBASIC27.34■■□□□ 1.97
ECHDC1Q9NTX5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ECHDC1Q9NTX5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
ECHDC1Q9NTX5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ECHDC1Q9NTX5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC27.33■■□□□ 1.97
ECHDC1Q9NTX5 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC27.33■■□□□ 1.97
ECHDC1Q9NTX5 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
ECHDC1Q9NTX5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ECHDC1Q9NTX5 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ECHDC1Q9NTX5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
ECHDC1Q9NTX5 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ECHDC1Q9NTX5 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC27.32■■□□□ 1.96
ECHDC1Q9NTX5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC27.32■■□□□ 1.96
ECHDC1Q9NTX5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC27.32■■□□□ 1.96
ECHDC1Q9NTX5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC27.32■■□□□ 1.96
ECHDC1Q9NTX5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ECHDC1Q9NTX5 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
ECHDC1Q9NTX5 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ECHDC1Q9NTX5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC27.32■■□□□ 1.96
ECHDC1Q9NTX5 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ECHDC1Q9NTX5 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC27.31■■□□□ 1.96
ECHDC1Q9NTX5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ECHDC1Q9NTX5 AC241377.3-202ENST00000626088 1088 ntBASIC27.31■■□□□ 1.96
ECHDC1Q9NTX5 AC241585.3-202ENST00000628937 1088 ntBASIC27.31■■□□□ 1.96
ECHDC1Q9NTX5 AC245100.8-202ENST00000629247 1058 ntBASIC27.31■■□□□ 1.96
ECHDC1Q9NTX5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC27.31■■□□□ 1.96
ECHDC1Q9NTX5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC27.31■■□□□ 1.96
ECHDC1Q9NTX5 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
ECHDC1Q9NTX5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC27.31■■□□□ 1.96
ECHDC1Q9NTX5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
ECHDC1Q9NTX5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
ECHDC1Q9NTX5 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
ECHDC1Q9NTX5 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
ECHDC1Q9NTX5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ECHDC1Q9NTX5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC27.3■■□□□ 1.96
ECHDC1Q9NTX5 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC27.3■■□□□ 1.96
ECHDC1Q9NTX5 AC099791.2-201ENST00000605725 427 ntBASIC27.3■■□□□ 1.96
ECHDC1Q9NTX5 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
ECHDC1Q9NTX5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
ECHDC1Q9NTX5 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
ECHDC1Q9NTX5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC27.29■■□□□ 1.96
ECHDC1Q9NTX5 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ECHDC1Q9NTX5 AL136116.3-201ENST00000402907 1138 ntBASIC27.29■■□□□ 1.96
ECHDC1Q9NTX5 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
ECHDC1Q9NTX5 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC27.29■■□□□ 1.96
ECHDC1Q9NTX5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC27.29■■□□□ 1.96
ECHDC1Q9NTX5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms