Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE1Q9NRR8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE1Q9NRR8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE1Q9NRR8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE1Q9NRR8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
CDC42SE1Q9NRR8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE1Q9NRR8 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE1Q9NRR8 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE1Q9NRR8 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE1Q9NRR8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC11.64□□□□□ -0.55
CDC42SE1Q9NRR8 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE1Q9NRR8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE1Q9NRR8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE1Q9NRR8 AC087289.5-201ENST00000586076 3175 ntBASIC11.64□□□□□ -0.55
CDC42SE1Q9NRR8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CDC42SE1Q9NRR8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
CDC42SE1Q9NRR8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE1Q9NRR8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE1Q9NRR8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC11.63□□□□□ -0.55
CDC42SE1Q9NRR8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE1Q9NRR8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
CDC42SE1Q9NRR8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
CDC42SE1Q9NRR8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE1Q9NRR8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE1Q9NRR8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC11.63□□□□□ -0.55
CDC42SE1Q9NRR8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE1Q9NRR8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
CDC42SE1Q9NRR8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE1Q9NRR8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE1Q9NRR8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
CDC42SE1Q9NRR8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE1Q9NRR8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC11.63□□□□□ -0.55
CDC42SE1Q9NRR8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE1Q9NRR8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE1Q9NRR8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE1Q9NRR8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE1Q9NRR8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE1Q9NRR8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE1Q9NRR8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
CDC42SE1Q9NRR8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE1Q9NRR8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC11.62□□□□□ -0.55
CDC42SE1Q9NRR8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE1Q9NRR8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE1Q9NRR8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE1Q9NRR8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
CDC42SE1Q9NRR8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC11.62□□□□□ -0.55
CDC42SE1Q9NRR8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE1Q9NRR8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE1Q9NRR8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
CDC42SE1Q9NRR8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE1Q9NRR8 SLC6A10P-202ENST00000431994 2058 ntBASIC11.61□□□□□ -0.55
CDC42SE1Q9NRR8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE1Q9NRR8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
CDC42SE1Q9NRR8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC11.61□□□□□ -0.55
CDC42SE1Q9NRR8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE1Q9NRR8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE1Q9NRR8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE1Q9NRR8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE1Q9NRR8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE1Q9NRR8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC11.61□□□□□ -0.55
CDC42SE1Q9NRR8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE1Q9NRR8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC11.61□□□□□ -0.55
CDC42SE1Q9NRR8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE1Q9NRR8 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE1Q9NRR8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE1Q9NRR8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CDC42SE1Q9NRR8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC11.61□□□□□ -0.55
CDC42SE1Q9NRR8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC11.61□□□□□ -0.55
CDC42SE1Q9NRR8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC11.61□□□□□ -0.55
CDC42SE1Q9NRR8 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE1Q9NRR8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE1Q9NRR8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE1Q9NRR8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CDC42SE1Q9NRR8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE1Q9NRR8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC11.6□□□□□ -0.55
CDC42SE1Q9NRR8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE1Q9NRR8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC11.6□□□□□ -0.55
CDC42SE1Q9NRR8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE1Q9NRR8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE1Q9NRR8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE1Q9NRR8 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC11.6□□□□□ -0.55
CDC42SE1Q9NRR8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE1Q9NRR8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE1Q9NRR8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE1Q9NRR8 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
CDC42SE1Q9NRR8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC11.6□□□□□ -0.55
CDC42SE1Q9NRR8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE1Q9NRR8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE1Q9NRR8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE1Q9NRR8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE1Q9NRR8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE1Q9NRR8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE1Q9NRR8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE1Q9NRR8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE1Q9NRR8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE1Q9NRR8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
CDC42SE1Q9NRR8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC11.59□□□□□ -0.55
CDC42SE1Q9NRR8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE1Q9NRR8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC42SE1Q9NRR8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms