Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.76■□□□□ 0.91
CTPS2Q9NRF8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTPS2Q9NRF8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.76■□□□□ 0.91
CTPS2Q9NRF8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CTPS2Q9NRF8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTPS2Q9NRF8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTPS2Q9NRF8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CTPS2Q9NRF8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTPS2Q9NRF8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTPS2Q9NRF8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
CTPS2Q9NRF8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTPS2Q9NRF8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CTPS2Q9NRF8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.75■□□□□ 0.91
CTPS2Q9NRF8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTPS2Q9NRF8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTPS2Q9NRF8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTPS2Q9NRF8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.74■□□□□ 0.91
CTPS2Q9NRF8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.74■□□□□ 0.91
CTPS2Q9NRF8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.74■□□□□ 0.91
CTPS2Q9NRF8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CTPS2Q9NRF8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTPS2Q9NRF8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTPS2Q9NRF8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTPS2Q9NRF8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CTPS2Q9NRF8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTPS2Q9NRF8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CTPS2Q9NRF8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTPS2Q9NRF8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.73■□□□□ 0.91
CTPS2Q9NRF8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTPS2Q9NRF8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTPS2Q9NRF8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTPS2Q9NRF8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.73■□□□□ 0.91
CTPS2Q9NRF8 KRT125P-201ENST00000546827 989 ntBASIC20.73■□□□□ 0.91
CTPS2Q9NRF8 Z92544.1-202ENST00000571933 1220 ntBASIC20.73■□□□□ 0.91
CTPS2Q9NRF8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.73■□□□□ 0.91
CTPS2Q9NRF8 SNX5-217ENST00000606557 1087 ntBASIC20.73■□□□□ 0.91
CTPS2Q9NRF8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTPS2Q9NRF8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CTPS2Q9NRF8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTPS2Q9NRF8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTPS2Q9NRF8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTPS2Q9NRF8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CTPS2Q9NRF8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTPS2Q9NRF8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CTPS2Q9NRF8 AC239859.2-201ENST00000444165 318 ntBASIC20.72■□□□□ 0.91
CTPS2Q9NRF8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.72■□□□□ 0.91
CTPS2Q9NRF8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.72■□□□□ 0.91
CTPS2Q9NRF8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTPS2Q9NRF8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTPS2Q9NRF8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTPS2Q9NRF8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTPS2Q9NRF8 AC079834.2-201ENST00000609776 1949 ntBASIC20.72■□□□□ 0.91
CTPS2Q9NRF8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.72■□□□□ 0.91
CTPS2Q9NRF8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CTPS2Q9NRF8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CTPS2Q9NRF8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTPS2Q9NRF8 AC079630.1-202ENST00000618127 1840 ntBASIC20.71■□□□□ 0.91
CTPS2Q9NRF8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CTPS2Q9NRF8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CTPS2Q9NRF8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CTPS2Q9NRF8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.71■□□□□ 0.91
CTPS2Q9NRF8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CTPS2Q9NRF8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTPS2Q9NRF8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTPS2Q9NRF8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTPS2Q9NRF8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CTPS2Q9NRF8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CTPS2Q9NRF8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTPS2Q9NRF8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTPS2Q9NRF8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTPS2Q9NRF8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTPS2Q9NRF8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CTPS2Q9NRF8 MIR4787-201ENST00000607364 84 ntBASIC20.7■□□□□ 0.9
CTPS2Q9NRF8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CTPS2Q9NRF8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.7■□□□□ 0.9
CTPS2Q9NRF8 AL117328.2-201ENST00000624617 1940 ntBASIC20.7■□□□□ 0.9
CTPS2Q9NRF8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CTPS2Q9NRF8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.7■□□□□ 0.9
CTPS2Q9NRF8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.69■□□□□ 0.9
CTPS2Q9NRF8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CTPS2Q9NRF8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CTPS2Q9NRF8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CTPS2Q9NRF8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CTPS2Q9NRF8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTPS2Q9NRF8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTPS2Q9NRF8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.69■□□□□ 0.9
CTPS2Q9NRF8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.69■□□□□ 0.9
CTPS2Q9NRF8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.69■□□□□ 0.9
CTPS2Q9NRF8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTPS2Q9NRF8 EP400NL-214ENST00000641289 2402 ntBASIC20.69■□□□□ 0.9
CTPS2Q9NRF8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTPS2Q9NRF8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTPS2Q9NRF8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CTPS2Q9NRF8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.68■□□□□ 0.9
CTPS2Q9NRF8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.68■□□□□ 0.9
CTPS2Q9NRF8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTPS2Q9NRF8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.68■□□□□ 0.9
CTPS2Q9NRF8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.68■□□□□ 0.9
CTPS2Q9NRF8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.68■□□□□ 0.9
CTPS2Q9NRF8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms