Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ARHGEF3Q9NR81 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
ARHGEF3Q9NR81 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
ARHGEF3Q9NR81 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.58■■□□□ 1.37
ARHGEF3Q9NR81 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.58■■□□□ 1.37
ARHGEF3Q9NR81 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ARHGEF3Q9NR81 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.36
ARHGEF3Q9NR81 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ARHGEF3Q9NR81 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ARHGEF3Q9NR81 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.57■■□□□ 1.36
ARHGEF3Q9NR81 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ARHGEF3Q9NR81 AC136469.2-201ENST00000623944 1028 ntBASIC23.57■■□□□ 1.36
ARHGEF3Q9NR81 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ARHGEF3Q9NR81 AC096887.2-201ENST00000623443 1957 ntBASIC23.57■■□□□ 1.36
ARHGEF3Q9NR81 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
ARHGEF3Q9NR81 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ARHGEF3Q9NR81 LINC01124-201ENST00000409786 2117 ntBASIC23.57■■□□□ 1.36
ARHGEF3Q9NR81 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ARHGEF3Q9NR81 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ARHGEF3Q9NR81 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.56■■□□□ 1.36
ARHGEF3Q9NR81 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
ARHGEF3Q9NR81 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
ARHGEF3Q9NR81 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
ARHGEF3Q9NR81 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.56■■□□□ 1.36
ARHGEF3Q9NR81 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ARHGEF3Q9NR81 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
ARHGEF3Q9NR81 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ARHGEF3Q9NR81 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
ARHGEF3Q9NR81 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ARHGEF3Q9NR81 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ARHGEF3Q9NR81 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
ARHGEF3Q9NR81 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.55■■□□□ 1.36
ARHGEF3Q9NR81 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.55■■□□□ 1.36
ARHGEF3Q9NR81 AC034268.1-201ENST00000441047 882 ntBASIC23.55■■□□□ 1.36
ARHGEF3Q9NR81 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.55■■□□□ 1.36
ARHGEF3Q9NR81 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.55■■□□□ 1.36
ARHGEF3Q9NR81 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ARHGEF3Q9NR81 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
ARHGEF3Q9NR81 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ARHGEF3Q9NR81 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.55■■□□□ 1.36
ARHGEF3Q9NR81 AC009102.2-201ENST00000606772 1639 ntBASIC23.55■■□□□ 1.36
ARHGEF3Q9NR81 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ARHGEF3Q9NR81 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ARHGEF3Q9NR81 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
ARHGEF3Q9NR81 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ARHGEF3Q9NR81 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.54■■□□□ 1.36
ARHGEF3Q9NR81 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.54■■□□□ 1.36
ARHGEF3Q9NR81 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
ARHGEF3Q9NR81 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.54■■□□□ 1.36
ARHGEF3Q9NR81 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
ARHGEF3Q9NR81 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.53■■□□□ 1.36
ARHGEF3Q9NR81 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ARHGEF3Q9NR81 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.53■■□□□ 1.36
ARHGEF3Q9NR81 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ARHGEF3Q9NR81 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ARHGEF3Q9NR81 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.53■■□□□ 1.36
ARHGEF3Q9NR81 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.53■■□□□ 1.36
ARHGEF3Q9NR81 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.53■■□□□ 1.36
ARHGEF3Q9NR81 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ARHGEF3Q9NR81 AC233992.3-201ENST00000607491 485 ntBASIC23.53■■□□□ 1.36
ARHGEF3Q9NR81 IKBKGP1-201ENST00000612193 1073 ntBASIC23.53■■□□□ 1.36
ARHGEF3Q9NR81 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.53■■□□□ 1.36
ARHGEF3Q9NR81 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ARHGEF3Q9NR81 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.53■■□□□ 1.36
ARHGEF3Q9NR81 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.52■■□□□ 1.36
ARHGEF3Q9NR81 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
ARHGEF3Q9NR81 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.52■■□□□ 1.36
ARHGEF3Q9NR81 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
ARHGEF3Q9NR81 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.52■■□□□ 1.36
ARHGEF3Q9NR81 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ARHGEF3Q9NR81 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ARHGEF3Q9NR81 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.52■■□□□ 1.36
ARHGEF3Q9NR81 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ARHGEF3Q9NR81 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
ARHGEF3Q9NR81 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ARHGEF3Q9NR81 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.51■■□□□ 1.35
ARHGEF3Q9NR81 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ARHGEF3Q9NR81 AC131274.2-201ENST00000580697 1507 ntBASIC23.51■■□□□ 1.35
ARHGEF3Q9NR81 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.51■■□□□ 1.35
ARHGEF3Q9NR81 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ARHGEF3Q9NR81 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.51■■□□□ 1.35
ARHGEF3Q9NR81 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.51■■□□□ 1.35
ARHGEF3Q9NR81 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.51■■□□□ 1.35
ARHGEF3Q9NR81 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.51■■□□□ 1.35
ARHGEF3Q9NR81 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.51■■□□□ 1.35
ARHGEF3Q9NR81 AC022517.1-201ENST00000592429 346 ntBASIC23.51■■□□□ 1.35
ARHGEF3Q9NR81 AL137784.2-201ENST00000607332 1000 ntBASIC23.51■■□□□ 1.35
ARHGEF3Q9NR81 AC241377.3-202ENST00000626088 1088 ntBASIC23.51■■□□□ 1.35
ARHGEF3Q9NR81 AC241585.3-202ENST00000628937 1088 ntBASIC23.51■■□□□ 1.35
ARHGEF3Q9NR81 AC245100.8-202ENST00000629247 1058 ntBASIC23.51■■□□□ 1.35
ARHGEF3Q9NR81 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
ARHGEF3Q9NR81 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ARHGEF3Q9NR81 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
ARHGEF3Q9NR81 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.51■■□□□ 1.35
ARHGEF3Q9NR81 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ARHGEF3Q9NR81 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ARHGEF3Q9NR81 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ARHGEF3Q9NR81 BX842568.3-201ENST00000418104 571 ntBASIC23.5■■□□□ 1.35
ARHGEF3Q9NR81 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
ARHGEF3Q9NR81 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms