Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.88■□□□□ 0.93
VCX3AQ9NNX9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
VCX3AQ9NNX9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VCX3AQ9NNX9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VCX3AQ9NNX9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.88■□□□□ 0.93
VCX3AQ9NNX9 AC136428.2-201ENST00000563187 214 ntBASIC20.88■□□□□ 0.93
VCX3AQ9NNX9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VCX3AQ9NNX9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.88■□□□□ 0.93
VCX3AQ9NNX9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VCX3AQ9NNX9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VCX3AQ9NNX9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VCX3AQ9NNX9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.88■□□□□ 0.93
VCX3AQ9NNX9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
VCX3AQ9NNX9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VCX3AQ9NNX9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCX3AQ9NNX9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCX3AQ9NNX9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCX3AQ9NNX9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
VCX3AQ9NNX9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCX3AQ9NNX9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.87■□□□□ 0.93
VCX3AQ9NNX9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
VCX3AQ9NNX9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
VCX3AQ9NNX9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.87■□□□□ 0.93
VCX3AQ9NNX9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCX3AQ9NNX9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.87■□□□□ 0.93
VCX3AQ9NNX9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
VCX3AQ9NNX9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
VCX3AQ9NNX9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
VCX3AQ9NNX9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCX3AQ9NNX9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
VCX3AQ9NNX9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.87■□□□□ 0.93
VCX3AQ9NNX9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VCX3AQ9NNX9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCX3AQ9NNX9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCX3AQ9NNX9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCX3AQ9NNX9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCX3AQ9NNX9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
VCX3AQ9NNX9 AL359258.2-201ENST00000564063 1566 ntBASIC20.86■□□□□ 0.93
VCX3AQ9NNX9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VCX3AQ9NNX9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.86■□□□□ 0.93
VCX3AQ9NNX9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VCX3AQ9NNX9 AC097358.2-201ENST00000607541 1159 ntBASIC20.86■□□□□ 0.93
VCX3AQ9NNX9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VCX3AQ9NNX9 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCX3AQ9NNX9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCX3AQ9NNX9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCX3AQ9NNX9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.86■□□□□ 0.93
VCX3AQ9NNX9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
VCX3AQ9NNX9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
VCX3AQ9NNX9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
VCX3AQ9NNX9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
VCX3AQ9NNX9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCX3AQ9NNX9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VCX3AQ9NNX9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
VCX3AQ9NNX9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCX3AQ9NNX9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
VCX3AQ9NNX9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCX3AQ9NNX9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCX3AQ9NNX9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
VCX3AQ9NNX9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCX3AQ9NNX9 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.85■□□□□ 0.93
VCX3AQ9NNX9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCX3AQ9NNX9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.84■□□□□ 0.93
VCX3AQ9NNX9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.84■□□□□ 0.93
VCX3AQ9NNX9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
VCX3AQ9NNX9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VCX3AQ9NNX9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCX3AQ9NNX9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
VCX3AQ9NNX9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCX3AQ9NNX9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCX3AQ9NNX9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
VCX3AQ9NNX9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.84■□□□□ 0.93
VCX3AQ9NNX9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCX3AQ9NNX9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.83■□□□□ 0.93
VCX3AQ9NNX9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VCX3AQ9NNX9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.83■□□□□ 0.93
VCX3AQ9NNX9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VCX3AQ9NNX9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VCX3AQ9NNX9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VCX3AQ9NNX9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VCX3AQ9NNX9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCX3AQ9NNX9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.82■□□□□ 0.92
VCX3AQ9NNX9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
VCX3AQ9NNX9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.82■□□□□ 0.92
VCX3AQ9NNX9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.82■□□□□ 0.92
VCX3AQ9NNX9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCX3AQ9NNX9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.82■□□□□ 0.92
VCX3AQ9NNX9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
VCX3AQ9NNX9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VCX3AQ9NNX9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
VCX3AQ9NNX9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VCX3AQ9NNX9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCX3AQ9NNX9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCX3AQ9NNX9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
VCX3AQ9NNX9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VCX3AQ9NNX9 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
VCX3AQ9NNX9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VCX3AQ9NNX9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VCX3AQ9NNX9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
VCX3AQ9NNX9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms