Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
NEUROD4Q9HD90 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NEUROD4Q9HD90 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.1■□□□□ 0.97
NEUROD4Q9HD90 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NEUROD4Q9HD90 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NEUROD4Q9HD90 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NEUROD4Q9HD90 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.1■□□□□ 0.97
NEUROD4Q9HD90 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NEUROD4Q9HD90 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.1■□□□□ 0.97
NEUROD4Q9HD90 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NEUROD4Q9HD90 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NEUROD4Q9HD90 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NEUROD4Q9HD90 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NEUROD4Q9HD90 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
NEUROD4Q9HD90 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.09■□□□□ 0.97
NEUROD4Q9HD90 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NEUROD4Q9HD90 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NEUROD4Q9HD90 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
NEUROD4Q9HD90 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NEUROD4Q9HD90 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
NEUROD4Q9HD90 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.09■□□□□ 0.97
NEUROD4Q9HD90 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.09■□□□□ 0.97
NEUROD4Q9HD90 Z92544.1-202ENST00000571933 1220 ntBASIC21.09■□□□□ 0.97
NEUROD4Q9HD90 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NEUROD4Q9HD90 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NEUROD4Q9HD90 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.09■□□□□ 0.97
NEUROD4Q9HD90 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NEUROD4Q9HD90 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NEUROD4Q9HD90 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
NEUROD4Q9HD90 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NEUROD4Q9HD90 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NEUROD4Q9HD90 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.08■□□□□ 0.97
NEUROD4Q9HD90 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.08■□□□□ 0.97
NEUROD4Q9HD90 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.08■□□□□ 0.97
NEUROD4Q9HD90 KRT125P-201ENST00000546827 989 ntBASIC21.08■□□□□ 0.97
NEUROD4Q9HD90 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.08■□□□□ 0.97
NEUROD4Q9HD90 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
NEUROD4Q9HD90 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.96
NEUROD4Q9HD90 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
NEUROD4Q9HD90 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NEUROD4Q9HD90 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
NEUROD4Q9HD90 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NEUROD4Q9HD90 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NEUROD4Q9HD90 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NEUROD4Q9HD90 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NEUROD4Q9HD90 GUSBP5-201ENST00000418136 578 ntBASIC21.07■□□□□ 0.96
NEUROD4Q9HD90 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.07■□□□□ 0.96
NEUROD4Q9HD90 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NEUROD4Q9HD90 AL353803.4-201ENST00000565882 1934 ntBASIC21.06■□□□□ 0.96
NEUROD4Q9HD90 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.06■□□□□ 0.96
NEUROD4Q9HD90 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.06■□□□□ 0.96
NEUROD4Q9HD90 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NEUROD4Q9HD90 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.06■□□□□ 0.96
NEUROD4Q9HD90 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.06■□□□□ 0.96
NEUROD4Q9HD90 AC144652.1-201ENST00000609974 1624 ntBASIC21.06■□□□□ 0.96
NEUROD4Q9HD90 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.06■□□□□ 0.96
NEUROD4Q9HD90 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.06■□□□□ 0.96
NEUROD4Q9HD90 C1orf229-201ENST00000623686 2258 ntBASIC21.06■□□□□ 0.96
NEUROD4Q9HD90 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEUROD4Q9HD90 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.05■□□□□ 0.96
NEUROD4Q9HD90 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NEUROD4Q9HD90 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEUROD4Q9HD90 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEUROD4Q9HD90 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.05■□□□□ 0.96
NEUROD4Q9HD90 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.05■□□□□ 0.96
NEUROD4Q9HD90 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.05■□□□□ 0.96
NEUROD4Q9HD90 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
NEUROD4Q9HD90 AC233723.2-201ENST00000623798 2106 ntBASIC21.05■□□□□ 0.96
NEUROD4Q9HD90 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NEUROD4Q9HD90 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NEUROD4Q9HD90 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
NEUROD4Q9HD90 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NEUROD4Q9HD90 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NEUROD4Q9HD90 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NEUROD4Q9HD90 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NEUROD4Q9HD90 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEUROD4Q9HD90 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
NEUROD4Q9HD90 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEUROD4Q9HD90 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEUROD4Q9HD90 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
NEUROD4Q9HD90 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
NEUROD4Q9HD90 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NEUROD4Q9HD90 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.03■□□□□ 0.96
NEUROD4Q9HD90 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.03■□□□□ 0.96
NEUROD4Q9HD90 AC092028.1-203ENST00000608262 953 ntBASIC21.03■□□□□ 0.96
NEUROD4Q9HD90 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
NEUROD4Q9HD90 AL117328.2-201ENST00000624617 1940 ntBASIC21.03■□□□□ 0.96
NEUROD4Q9HD90 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEUROD4Q9HD90 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NEUROD4Q9HD90 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.03■□□□□ 0.96
NEUROD4Q9HD90 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NEUROD4Q9HD90 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NEUROD4Q9HD90 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NEUROD4Q9HD90 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.02■□□□□ 0.96
NEUROD4Q9HD90 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
NEUROD4Q9HD90 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
NEUROD4Q9HD90 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NEUROD4Q9HD90 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.02■□□□□ 0.96
NEUROD4Q9HD90 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NEUROD4Q9HD90 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms