Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 MIR6724-3-201ENST00000622482 92 ntBASIC21.67■■□□□ 1.06
CLK4Q9HAZ1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.67■■□□□ 1.06
CLK4Q9HAZ1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.66■■□□□ 1.06
CLK4Q9HAZ1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLK4Q9HAZ1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLK4Q9HAZ1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLK4Q9HAZ1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CLK4Q9HAZ1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLK4Q9HAZ1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLK4Q9HAZ1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLK4Q9HAZ1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLK4Q9HAZ1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLK4Q9HAZ1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
CLK4Q9HAZ1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLK4Q9HAZ1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.66■■□□□ 1.06
CLK4Q9HAZ1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLK4Q9HAZ1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLK4Q9HAZ1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLK4Q9HAZ1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CLK4Q9HAZ1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLK4Q9HAZ1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLK4Q9HAZ1 AL356441.2-201ENST00000443009 864 ntBASIC21.65■■□□□ 1.06
CLK4Q9HAZ1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLK4Q9HAZ1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.65■■□□□ 1.06
CLK4Q9HAZ1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CLK4Q9HAZ1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLK4Q9HAZ1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.65■■□□□ 1.06
CLK4Q9HAZ1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLK4Q9HAZ1 AL024507.2-201ENST00000606070 2574 ntBASIC21.65■■□□□ 1.06
CLK4Q9HAZ1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.65■■□□□ 1.06
CLK4Q9HAZ1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLK4Q9HAZ1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CLK4Q9HAZ1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLK4Q9HAZ1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
CLK4Q9HAZ1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLK4Q9HAZ1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLK4Q9HAZ1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.64■■□□□ 1.05
CLK4Q9HAZ1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.64■■□□□ 1.05
CLK4Q9HAZ1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CLK4Q9HAZ1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLK4Q9HAZ1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLK4Q9HAZ1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLK4Q9HAZ1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CLK4Q9HAZ1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLK4Q9HAZ1 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.63■■□□□ 1.05
CLK4Q9HAZ1 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.63■■□□□ 1.05
CLK4Q9HAZ1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLK4Q9HAZ1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CLK4Q9HAZ1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.63■■□□□ 1.05
CLK4Q9HAZ1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLK4Q9HAZ1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CLK4Q9HAZ1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.63■■□□□ 1.05
CLK4Q9HAZ1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLK4Q9HAZ1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
CLK4Q9HAZ1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLK4Q9HAZ1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.62■■□□□ 1.05
CLK4Q9HAZ1 AC005703.6-201ENST00000623265 1329 ntBASIC21.62■■□□□ 1.05
CLK4Q9HAZ1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLK4Q9HAZ1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLK4Q9HAZ1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.62■■□□□ 1.05
CLK4Q9HAZ1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLK4Q9HAZ1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.62■■□□□ 1.05
CLK4Q9HAZ1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.62■■□□□ 1.05
CLK4Q9HAZ1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLK4Q9HAZ1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLK4Q9HAZ1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.62■■□□□ 1.05
CLK4Q9HAZ1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLK4Q9HAZ1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLK4Q9HAZ1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLK4Q9HAZ1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLK4Q9HAZ1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLK4Q9HAZ1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLK4Q9HAZ1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLK4Q9HAZ1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLK4Q9HAZ1 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.6■■□□□ 1.05
CLK4Q9HAZ1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms