Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC24.59■■□□□ 1.53
VPS16Q9H269 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.59■■□□□ 1.53
VPS16Q9H269 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
VPS16Q9H269 AC103834.1-201ENST00000520383 144 ntBASIC24.59■■□□□ 1.53
VPS16Q9H269 AC012354.3-201ENST00000623734 483 ntBASIC24.59■■□□□ 1.53
VPS16Q9H269 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
VPS16Q9H269 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
VPS16Q9H269 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
VPS16Q9H269 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.59■■□□□ 1.53
VPS16Q9H269 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.58■■□□□ 1.53
VPS16Q9H269 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
VPS16Q9H269 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.58■■□□□ 1.53
VPS16Q9H269 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.58■■□□□ 1.53
VPS16Q9H269 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
VPS16Q9H269 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
VPS16Q9H269 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
VPS16Q9H269 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
VPS16Q9H269 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.52
VPS16Q9H269 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
VPS16Q9H269 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.57■■□□□ 1.52
VPS16Q9H269 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
VPS16Q9H269 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.57■■□□□ 1.52
VPS16Q9H269 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.57■■□□□ 1.52
VPS16Q9H269 LINC00526-201ENST00000581067 1875 ntBASIC24.57■■□□□ 1.52
VPS16Q9H269 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
VPS16Q9H269 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
VPS16Q9H269 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
VPS16Q9H269 AL353803.4-201ENST00000565882 1934 ntBASIC24.57■■□□□ 1.52
VPS16Q9H269 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
VPS16Q9H269 LSR-203ENST00000360798 1963 ntTSL 2 BASIC24.56■■□□□ 1.52
VPS16Q9H269 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.56■■□□□ 1.52
VPS16Q9H269 CLDN5-201ENST00000403084 2357 ntBASIC24.56■■□□□ 1.52
VPS16Q9H269 KRT8P33-201ENST00000508125 1423 ntBASIC24.56■■□□□ 1.52
VPS16Q9H269 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.56■■□□□ 1.52
VPS16Q9H269 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.56■■□□□ 1.52
VPS16Q9H269 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
VPS16Q9H269 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
VPS16Q9H269 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
VPS16Q9H269 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.56■■□□□ 1.52
VPS16Q9H269 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
VPS16Q9H269 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
VPS16Q9H269 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.55■■□□□ 1.52
VPS16Q9H269 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.55■■□□□ 1.52
VPS16Q9H269 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
VPS16Q9H269 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24.55■■□□□ 1.52
VPS16Q9H269 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
VPS16Q9H269 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
VPS16Q9H269 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
VPS16Q9H269 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.54■■□□□ 1.52
VPS16Q9H269 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
VPS16Q9H269 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
VPS16Q9H269 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
VPS16Q9H269 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
VPS16Q9H269 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
VPS16Q9H269 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
VPS16Q9H269 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
VPS16Q9H269 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
VPS16Q9H269 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.53■■□□□ 1.52
VPS16Q9H269 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
VPS16Q9H269 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC24.53■■□□□ 1.52
VPS16Q9H269 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
VPS16Q9H269 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.53■■□□□ 1.52
VPS16Q9H269 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
VPS16Q9H269 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.53■■□□□ 1.52
VPS16Q9H269 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
VPS16Q9H269 ECEL1P1-201ENST00000373592 1742 ntBASIC24.52■■□□□ 1.52
VPS16Q9H269 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
VPS16Q9H269 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
VPS16Q9H269 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
VPS16Q9H269 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
VPS16Q9H269 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.52■■□□□ 1.52
VPS16Q9H269 AC103724.3-201ENST00000564481 992 ntBASIC24.52■■□□□ 1.52
VPS16Q9H269 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.52■■□□□ 1.52
VPS16Q9H269 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
VPS16Q9H269 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
VPS16Q9H269 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
VPS16Q9H269 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
VPS16Q9H269 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
VPS16Q9H269 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.51■■□□□ 1.51
VPS16Q9H269 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
VPS16Q9H269 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
VPS16Q9H269 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.51■■□□□ 1.51
VPS16Q9H269 SNX5-217ENST00000606557 1087 ntBASIC24.51■■□□□ 1.51
VPS16Q9H269 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
VPS16Q9H269 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
VPS16Q9H269 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
VPS16Q9H269 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
VPS16Q9H269 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
VPS16Q9H269 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
VPS16Q9H269 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
VPS16Q9H269 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.51■■□□□ 1.51
VPS16Q9H269 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
VPS16Q9H269 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.5■■□□□ 1.51
VPS16Q9H269 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
VPS16Q9H269 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.5■■□□□ 1.51
VPS16Q9H269 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
VPS16Q9H269 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
VPS16Q9H269 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS16Q9H269 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.49■■□□□ 1.51
VPS16Q9H269 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms