Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COMMD4Q9H0A8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COMMD4Q9H0A8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COMMD4Q9H0A8 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COMMD4Q9H0A8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
COMMD4Q9H0A8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
COMMD4Q9H0A8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COMMD4Q9H0A8 U85056.1-201ENST00000616429 682 ntBASIC19.72■□□□□ 0.75
COMMD4Q9H0A8 AC129492.7-201ENST00000622992 756 ntBASIC19.72■□□□□ 0.75
COMMD4Q9H0A8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
COMMD4Q9H0A8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COMMD4Q9H0A8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COMMD4Q9H0A8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COMMD4Q9H0A8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
COMMD4Q9H0A8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD4Q9H0A8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD4Q9H0A8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.71■□□□□ 0.75
COMMD4Q9H0A8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD4Q9H0A8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
COMMD4Q9H0A8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD4Q9H0A8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD4Q9H0A8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.71■□□□□ 0.75
COMMD4Q9H0A8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD4Q9H0A8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD4Q9H0A8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD4Q9H0A8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD4Q9H0A8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD4Q9H0A8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COMMD4Q9H0A8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
COMMD4Q9H0A8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
COMMD4Q9H0A8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD4Q9H0A8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.7■□□□□ 0.74
COMMD4Q9H0A8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD4Q9H0A8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
COMMD4Q9H0A8 AC139795.1-202ENST00000500444 432 ntBASIC19.7■□□□□ 0.74
COMMD4Q9H0A8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.7■□□□□ 0.74
COMMD4Q9H0A8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD4Q9H0A8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD4Q9H0A8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COMMD4Q9H0A8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.7■□□□□ 0.74
COMMD4Q9H0A8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD4Q9H0A8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD4Q9H0A8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD4Q9H0A8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD4Q9H0A8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD4Q9H0A8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD4Q9H0A8 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.69■□□□□ 0.74
COMMD4Q9H0A8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD4Q9H0A8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD4Q9H0A8 AC019171.1-201ENST00000601251 1056 ntBASIC19.69■□□□□ 0.74
COMMD4Q9H0A8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD4Q9H0A8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD4Q9H0A8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COMMD4Q9H0A8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD4Q9H0A8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD4Q9H0A8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD4Q9H0A8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.68■□□□□ 0.74
COMMD4Q9H0A8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COMMD4Q9H0A8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD4Q9H0A8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD4Q9H0A8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.68■□□□□ 0.74
COMMD4Q9H0A8 AC242852.2-201ENST00000615738 1807 ntBASIC19.68■□□□□ 0.74
COMMD4Q9H0A8 AC079630.1-202ENST00000618127 1840 ntBASIC19.68■□□□□ 0.74
COMMD4Q9H0A8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.68■□□□□ 0.74
COMMD4Q9H0A8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD4Q9H0A8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COMMD4Q9H0A8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD4Q9H0A8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
COMMD4Q9H0A8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
COMMD4Q9H0A8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD4Q9H0A8 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD4Q9H0A8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.67■□□□□ 0.74
COMMD4Q9H0A8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.67■□□□□ 0.74
COMMD4Q9H0A8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD4Q9H0A8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.67■□□□□ 0.74
COMMD4Q9H0A8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD4Q9H0A8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD4Q9H0A8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD4Q9H0A8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COMMD4Q9H0A8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD4Q9H0A8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.66■□□□□ 0.74
COMMD4Q9H0A8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD4Q9H0A8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.66■□□□□ 0.74
COMMD4Q9H0A8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.66■□□□□ 0.74
COMMD4Q9H0A8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.66■□□□□ 0.74
COMMD4Q9H0A8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD4Q9H0A8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD4Q9H0A8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD4Q9H0A8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.66■□□□□ 0.74
COMMD4Q9H0A8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD4Q9H0A8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD4Q9H0A8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD4Q9H0A8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD4Q9H0A8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.65■□□□□ 0.74
COMMD4Q9H0A8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
COMMD4Q9H0A8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD4Q9H0A8 ABHD17AP5-201ENST00000580133 923 ntBASIC19.65■□□□□ 0.74
COMMD4Q9H0A8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD4Q9H0A8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD4Q9H0A8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms