Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 PSMC1P12-201ENST00000436509 1314 ntBASIC13.65□□□□□ -0.22
KRTAP3-3Q9BYR6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC13.65□□□□□ -0.22
KRTAP3-3Q9BYR6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
KRTAP3-3Q9BYR6 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KRTAP3-3Q9BYR6 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
KRTAP3-3Q9BYR6 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
KRTAP3-3Q9BYR6 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
KRTAP3-3Q9BYR6 UBE2V1P6-201ENST00000430840 422 ntBASIC13.65□□□□□ -0.22
KRTAP3-3Q9BYR6 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC13.65□□□□□ -0.22
KRTAP3-3Q9BYR6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.65□□□□□ -0.22
KRTAP3-3Q9BYR6 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC13.65□□□□□ -0.22
KRTAP3-3Q9BYR6 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC13.65□□□□□ -0.22
KRTAP3-3Q9BYR6 SAA2-203ENST00000526900 687 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
KRTAP3-3Q9BYR6 CDH13-207ENST00000565636 810 ntTSL 5 BASIC13.65□□□□□ -0.22
KRTAP3-3Q9BYR6 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KRTAP3-3Q9BYR6 AP005202.1-202ENST00000583065 748 ntTSL 5 BASIC13.65□□□□□ -0.22
KRTAP3-3Q9BYR6 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC13.65□□□□□ -0.22
KRTAP3-3Q9BYR6 AC097478.3-201ENST00000620420 872 ntBASIC13.65□□□□□ -0.22
KRTAP3-3Q9BYR6 AC019226.1-201ENST00000625666 515 ntBASIC13.65□□□□□ -0.22
KRTAP3-3Q9BYR6 PFDN1-201ENST00000261813 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KRTAP3-3Q9BYR6 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
KRTAP3-3Q9BYR6 AC023050.4-201ENST00000538830 1380 ntBASIC13.65□□□□□ -0.22
KRTAP3-3Q9BYR6 TTC1-201ENST00000231238 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KRTAP3-3Q9BYR6 CLEC4C-205ENST00000542353 1314 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 OR5AQ1P-203ENST00000641818 1529 ntBASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 LINC01934-205ENST00000435411 1771 ntTSL 5 BASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 Y_RNA.110-201ENST00000363220 99 ntBASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 RNU6-925P-201ENST00000384629 104 ntBASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 AL117339.1-201ENST00000419779 428 ntTSL 2 BASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 ID2-AS1-207ENST00000455965 794 ntTSL 4 BASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 AC091435.1-201ENST00000505442 584 ntBASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 AP001099.1-201ENST00000579385 855 ntTSL 5 BASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 MIR4719-201ENST00000585233 84 ntBASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 AC040174.2-201ENST00000602701 465 ntBASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 AL049844.2-201ENST00000604280 628 ntBASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KRTAP3-3Q9BYR6 FXR1-220ENST00000491062 1768 ntTSL 2 BASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 THUMPD1P1-201ENST00000400014 1041 ntBASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 RN7SKP182-201ENST00000410772 298 ntBASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 RPS3AP25-201ENST00000411660 793 ntBASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 AL512326.1-201ENST00000443050 721 ntBASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 Z97198.1-201ENST00000452366 658 ntTSL 2 BASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 TPTE2P5-203ENST00000458118 728 ntBASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 AC087894.1-201ENST00000538359 518 ntBASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 AC089998.4-201ENST00000552532 459 ntTSL 3 BASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 AL137796.1-201ENST00000608190 577 ntBASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 AL355073.2-201ENST00000612106 557 ntBASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 CU638689.5-201ENST00000623892 1032 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 LINC01132-202ENST00000641214 1085 ntBASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRTAP3-3Q9BYR6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KRTAP3-3Q9BYR6 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KRTAP3-3Q9BYR6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KRTAP3-3Q9BYR6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
KRTAP3-3Q9BYR6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KRTAP3-3Q9BYR6 ANKRD20A11P-205ENST00000442192 920 ntTSL 3 BASIC13.62□□□□□ -0.23
KRTAP3-3Q9BYR6 MTCO2P6-201ENST00000463134 685 ntBASIC13.62□□□□□ -0.23
KRTAP3-3Q9BYR6 AC117522.2-201ENST00000510049 657 ntBASIC13.62□□□□□ -0.23
KRTAP3-3Q9BYR6 SNORA48.9-201ENST00000516419 162 ntBASIC13.62□□□□□ -0.23
KRTAP3-3Q9BYR6 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC13.62□□□□□ -0.23
KRTAP3-3Q9BYR6 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC13.62□□□□□ -0.23
KRTAP3-3Q9BYR6 AC061975.8-201ENST00000587058 721 ntBASIC13.62□□□□□ -0.23
KRTAP3-3Q9BYR6 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC13.62□□□□□ -0.23
KRTAP3-3Q9BYR6 AC097504.2-201ENST00000608088 454 ntBASIC13.62□□□□□ -0.23
KRTAP3-3Q9BYR6 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC13.62□□□□□ -0.23
KRTAP3-3Q9BYR6 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC13.62□□□□□ -0.23
KRTAP3-3Q9BYR6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC13.62□□□□□ -0.23
KRTAP3-3Q9BYR6 SYT14P1-202ENST00000600441 1448 ntBASIC13.62□□□□□ -0.23
KRTAP3-3Q9BYR6 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KRTAP3-3Q9BYR6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms