Protein–RNA interactions for Protein: Q99633

PRPF18, Pre-mRNA-splicing factor 18, humanhuman

Known RBP Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18Q99633 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRPF18Q99633 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRPF18Q99633 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRPF18Q99633 PKD1P6-201ENST00000343738 4769 ntBASIC21.61■■□□□ 1.05
PRPF18Q99633 AC092068.2-201ENST00000590491 1708 ntBASIC21.61■■□□□ 1.05
PRPF18Q99633 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PRPF18Q99633 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRPF18Q99633 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.61■■□□□ 1.05
PRPF18Q99633 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PRPF18Q99633 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PRPF18Q99633 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PRPF18Q99633 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PRPF18Q99633 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.6■■□□□ 1.05
PRPF18Q99633 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRPF18Q99633 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.6■■□□□ 1.05
PRPF18Q99633 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.6■■□□□ 1.05
PRPF18Q99633 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
PRPF18Q99633 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRPF18Q99633 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRPF18Q99633 AC137767.1-201ENST00000602918 1920 ntBASIC21.6■■□□□ 1.05
PRPF18Q99633 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.6■■□□□ 1.05
PRPF18Q99633 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRPF18Q99633 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRPF18Q99633 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
PRPF18Q99633 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRPF18Q99633 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRPF18Q99633 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRPF18Q99633 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRPF18Q99633 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PRPF18Q99633 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.59■■□□□ 1.05
PRPF18Q99633 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.59■■□□□ 1.05
PRPF18Q99633 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.59■■□□□ 1.05
PRPF18Q99633 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.59■■□□□ 1.05
PRPF18Q99633 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PRPF18Q99633 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PRPF18Q99633 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PRPF18Q99633 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.59■■□□□ 1.05
PRPF18Q99633 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRPF18Q99633 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PRPF18Q99633 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.59■■□□□ 1.05
PRPF18Q99633 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRPF18Q99633 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PRPF18Q99633 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
PRPF18Q99633 LINC00526-201ENST00000581067 1875 ntBASIC21.58■■□□□ 1.05
PRPF18Q99633 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PRPF18Q99633 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PRPF18Q99633 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
PRPF18Q99633 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PRPF18Q99633 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.58■■□□□ 1.05
PRPF18Q99633 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.58■■□□□ 1.05
PRPF18Q99633 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
PRPF18Q99633 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PRPF18Q99633 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PRPF18Q99633 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PRPF18Q99633 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRPF18Q99633 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRPF18Q99633 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRPF18Q99633 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.57■■□□□ 1.04
PRPF18Q99633 AC010980.1-201ENST00000587192 1142 ntBASIC21.57■■□□□ 1.04
PRPF18Q99633 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRPF18Q99633 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PRPF18Q99633 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.57■■□□□ 1.04
PRPF18Q99633 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRPF18Q99633 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRPF18Q99633 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRPF18Q99633 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRPF18Q99633 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
PRPF18Q99633 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PRPF18Q99633 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
PRPF18Q99633 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.56■■□□□ 1.04
PRPF18Q99633 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRPF18Q99633 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRPF18Q99633 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.56■■□□□ 1.04
PRPF18Q99633 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.56■■□□□ 1.04
PRPF18Q99633 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.56■■□□□ 1.04
PRPF18Q99633 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.56■■□□□ 1.04
PRPF18Q99633 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRPF18Q99633 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRPF18Q99633 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.56■■□□□ 1.04
PRPF18Q99633 SLC25A24-204ENST00000569674 2357 ntBASIC21.55■■□□□ 1.04
PRPF18Q99633 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRPF18Q99633 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PRPF18Q99633 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRPF18Q99633 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRPF18Q99633 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRPF18Q99633 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRPF18Q99633 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.55■■□□□ 1.04
PRPF18Q99633 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.55■■□□□ 1.04
PRPF18Q99633 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.55■■□□□ 1.04
PRPF18Q99633 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PRPF18Q99633 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRPF18Q99633 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRPF18Q99633 MIR4281-201ENST00000580852 62 ntBASIC21.55■■□□□ 1.04
PRPF18Q99633 PVT1_1.1-201ENST00000615125 194 ntBASIC21.55■■□□□ 1.04
PRPF18Q99633 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PRPF18Q99633 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRPF18Q99633 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PRPF18Q99633 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRPF18Q99633 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRPF18Q99633 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms