Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.72■■□□□ 1.55
TRIM43Q96BQ3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM43Q96BQ3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.71■■□□□ 1.55
TRIM43Q96BQ3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.71■■□□□ 1.55
TRIM43Q96BQ3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.71■■□□□ 1.55
TRIM43Q96BQ3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
TRIM43Q96BQ3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.71■■□□□ 1.55
TRIM43Q96BQ3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC24.71■■□□□ 1.55
TRIM43Q96BQ3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.71■■□□□ 1.55
TRIM43Q96BQ3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM43Q96BQ3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.71■■□□□ 1.55
TRIM43Q96BQ3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM43Q96BQ3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.71■■□□□ 1.55
TRIM43Q96BQ3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM43Q96BQ3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.71■■□□□ 1.55
TRIM43Q96BQ3 AC092803.2-201ENST00000564287 1899 ntBASIC24.7■■□□□ 1.55
TRIM43Q96BQ3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
TRIM43Q96BQ3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TRIM43Q96BQ3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
TRIM43Q96BQ3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TRIM43Q96BQ3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
TRIM43Q96BQ3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.7■■□□□ 1.54
TRIM43Q96BQ3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TRIM43Q96BQ3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
TRIM43Q96BQ3 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.69■■□□□ 1.54
TRIM43Q96BQ3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
TRIM43Q96BQ3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRIM43Q96BQ3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.69■■□□□ 1.54
TRIM43Q96BQ3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRIM43Q96BQ3 OR2I1P-207ENST00000453522 948 ntBASIC24.69■■□□□ 1.54
TRIM43Q96BQ3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.69■■□□□ 1.54
TRIM43Q96BQ3 AL499627.2-201ENST00000606283 725 ntBASIC24.69■■□□□ 1.54
TRIM43Q96BQ3 TMEM191A-211ENST00000637163 1067 ntBASIC24.69■■□□□ 1.54
TRIM43Q96BQ3 AC105233.4-201ENST00000642045 216 ntBASIC24.69■■□□□ 1.54
TRIM43Q96BQ3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRIM43Q96BQ3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRIM43Q96BQ3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TRIM43Q96BQ3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.68■■□□□ 1.54
TRIM43Q96BQ3 AL355802.2-201ENST00000402069 882 ntBASIC24.68■■□□□ 1.54
TRIM43Q96BQ3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
TRIM43Q96BQ3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.68■■□□□ 1.54
TRIM43Q96BQ3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.68■■□□□ 1.54
TRIM43Q96BQ3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TRIM43Q96BQ3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
TRIM43Q96BQ3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TRIM43Q96BQ3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TRIM43Q96BQ3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
TRIM43Q96BQ3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM43Q96BQ3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24.67■■□□□ 1.54
TRIM43Q96BQ3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM43Q96BQ3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM43Q96BQ3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.67■■□□□ 1.54
TRIM43Q96BQ3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM43Q96BQ3 CROCCP5-201ENST00000436658 830 ntBASIC24.67■■□□□ 1.54
TRIM43Q96BQ3 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.67■■□□□ 1.54
TRIM43Q96BQ3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.67■■□□□ 1.54
TRIM43Q96BQ3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM43Q96BQ3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM43Q96BQ3 ALDH1A3-203ENST00000557963 1670 ntBASIC24.66■■□□□ 1.54
TRIM43Q96BQ3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
TRIM43Q96BQ3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TRIM43Q96BQ3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.66■■□□□ 1.54
TRIM43Q96BQ3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC24.66■■□□□ 1.54
TRIM43Q96BQ3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TRIM43Q96BQ3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.66■■□□□ 1.54
TRIM43Q96BQ3 AL109923.1-201ENST00000618799 583 ntBASIC24.66■■□□□ 1.54
TRIM43Q96BQ3 AL161729.1-201ENST00000604104 1402 ntBASIC24.66■■□□□ 1.54
TRIM43Q96BQ3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TRIM43Q96BQ3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
TRIM43Q96BQ3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.66■■□□□ 1.54
TRIM43Q96BQ3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.65■■□□□ 1.54
TRIM43Q96BQ3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
TRIM43Q96BQ3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
TRIM43Q96BQ3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.65■■□□□ 1.54
TRIM43Q96BQ3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
TRIM43Q96BQ3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.65■■□□□ 1.54
TRIM43Q96BQ3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRIM43Q96BQ3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
TRIM43Q96BQ3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TRIM43Q96BQ3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.64■■□□□ 1.54
TRIM43Q96BQ3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.64■■□□□ 1.54
TRIM43Q96BQ3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM43Q96BQ3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM43Q96BQ3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM43Q96BQ3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM43Q96BQ3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM43Q96BQ3 AC006970.2-201ENST00000450065 779 ntBASIC24.63■■□□□ 1.53
TRIM43Q96BQ3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
TRIM43Q96BQ3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.63■■□□□ 1.53
TRIM43Q96BQ3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC24.63■■□□□ 1.53
TRIM43Q96BQ3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.63■■□□□ 1.53
TRIM43Q96BQ3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM43Q96BQ3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM43Q96BQ3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
TRIM43Q96BQ3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM43Q96BQ3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM43Q96BQ3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM43Q96BQ3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM43Q96BQ3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC24.62■■□□□ 1.53
TRIM43Q96BQ3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms