Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
RAPGEF4Q8WZA2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
RAPGEF4Q8WZA2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
RAPGEF4Q8WZA2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC29.69■■■□□ 2.34
RAPGEF4Q8WZA2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC29.69■■■□□ 2.34
RAPGEF4Q8WZA2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
RAPGEF4Q8WZA2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
RAPGEF4Q8WZA2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
RAPGEF4Q8WZA2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC29.68■■■□□ 2.34
RAPGEF4Q8WZA2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC29.68■■■□□ 2.34
RAPGEF4Q8WZA2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC29.68■■■□□ 2.34
RAPGEF4Q8WZA2 AL137784.2-201ENST00000607332 1000 ntBASIC29.68■■■□□ 2.34
RAPGEF4Q8WZA2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
RAPGEF4Q8WZA2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
RAPGEF4Q8WZA2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RAPGEF4Q8WZA2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC29.67■■■□□ 2.34
RAPGEF4Q8WZA2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
RAPGEF4Q8WZA2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RAPGEF4Q8WZA2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
RAPGEF4Q8WZA2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RAPGEF4Q8WZA2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
RAPGEF4Q8WZA2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC29.67■■■□□ 2.34
RAPGEF4Q8WZA2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC29.67■■■□□ 2.34
RAPGEF4Q8WZA2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC29.67■■■□□ 2.34
RAPGEF4Q8WZA2 AC010525.1-201ENST00000585559 441 ntBASIC29.67■■■□□ 2.34
RAPGEF4Q8WZA2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC29.67■■■□□ 2.34
RAPGEF4Q8WZA2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC29.67■■■□□ 2.34
RAPGEF4Q8WZA2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RAPGEF4Q8WZA2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC29.66■■■□□ 2.34
RAPGEF4Q8WZA2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
RAPGEF4Q8WZA2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
RAPGEF4Q8WZA2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
RAPGEF4Q8WZA2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
RAPGEF4Q8WZA2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC29.66■■■□□ 2.34
RAPGEF4Q8WZA2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
RAPGEF4Q8WZA2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC29.66■■■□□ 2.34
RAPGEF4Q8WZA2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
RAPGEF4Q8WZA2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
RAPGEF4Q8WZA2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
RAPGEF4Q8WZA2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
RAPGEF4Q8WZA2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC29.65■■■□□ 2.34
RAPGEF4Q8WZA2 OR2I1P-207ENST00000453522 948 ntBASIC29.65■■■□□ 2.34
RAPGEF4Q8WZA2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC29.65■■■□□ 2.34
RAPGEF4Q8WZA2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC29.65■■■□□ 2.34
RAPGEF4Q8WZA2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
RAPGEF4Q8WZA2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
RAPGEF4Q8WZA2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC29.64■■■□□ 2.34
RAPGEF4Q8WZA2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
RAPGEF4Q8WZA2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC29.64■■■□□ 2.34
RAPGEF4Q8WZA2 AC092437.1-201ENST00000624794 1048 ntBASIC29.64■■■□□ 2.34
RAPGEF4Q8WZA2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC29.64■■■□□ 2.34
RAPGEF4Q8WZA2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
RAPGEF4Q8WZA2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
RAPGEF4Q8WZA2 FP325331.1-202ENST00000623531 1380 ntBASIC29.64■■■□□ 2.33
RAPGEF4Q8WZA2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC29.63■■■□□ 2.33
RAPGEF4Q8WZA2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
RAPGEF4Q8WZA2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
RAPGEF4Q8WZA2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
RAPGEF4Q8WZA2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC29.63■■■□□ 2.33
RAPGEF4Q8WZA2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC29.63■■■□□ 2.33
RAPGEF4Q8WZA2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
RAPGEF4Q8WZA2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC29.63■■■□□ 2.33
RAPGEF4Q8WZA2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
RAPGEF4Q8WZA2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
RAPGEF4Q8WZA2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC29.63■■■□□ 2.33
RAPGEF4Q8WZA2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC29.62■■■□□ 2.33
RAPGEF4Q8WZA2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC29.62■■■□□ 2.33
RAPGEF4Q8WZA2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RAPGEF4Q8WZA2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC29.62■■■□□ 2.33
RAPGEF4Q8WZA2 DUX4L4-201ENST00000566884 1269 ntBASIC29.62■■■□□ 2.33
RAPGEF4Q8WZA2 CCDC92B-201ENST00000575506 885 ntBASIC29.62■■■□□ 2.33
RAPGEF4Q8WZA2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC29.62■■■□□ 2.33
RAPGEF4Q8WZA2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
RAPGEF4Q8WZA2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC29.62■■■□□ 2.33
RAPGEF4Q8WZA2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
RAPGEF4Q8WZA2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
RAPGEF4Q8WZA2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC29.61■■■□□ 2.33
RAPGEF4Q8WZA2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
RAPGEF4Q8WZA2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC29.61■■■□□ 2.33
RAPGEF4Q8WZA2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
RAPGEF4Q8WZA2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
RAPGEF4Q8WZA2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RAPGEF4Q8WZA2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RAPGEF4Q8WZA2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
RAPGEF4Q8WZA2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
RAPGEF4Q8WZA2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC29.6■■■□□ 2.33
RAPGEF4Q8WZA2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
RAPGEF4Q8WZA2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
RAPGEF4Q8WZA2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
RAPGEF4Q8WZA2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC29.59■■■□□ 2.33
RAPGEF4Q8WZA2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
RAPGEF4Q8WZA2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC29.59■■■□□ 2.33
RAPGEF4Q8WZA2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
RAPGEF4Q8WZA2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC29.59■■■□□ 2.33
RAPGEF4Q8WZA2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
RAPGEF4Q8WZA2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC29.58■■■□□ 2.33
RAPGEF4Q8WZA2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
RAPGEF4Q8WZA2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC29.58■■■□□ 2.33
RAPGEF4Q8WZA2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC29.57■■■□□ 2.32
RAPGEF4Q8WZA2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms