Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.59■□□□□ 0.41
MBD3L1Q8WWY6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MBD3L1Q8WWY6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
MBD3L1Q8WWY6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MBD3L1Q8WWY6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MBD3L1Q8WWY6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MBD3L1Q8WWY6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MBD3L1Q8WWY6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MBD3L1Q8WWY6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MBD3L1Q8WWY6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
MBD3L1Q8WWY6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.58■□□□□ 0.41
MBD3L1Q8WWY6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MBD3L1Q8WWY6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MBD3L1Q8WWY6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
MBD3L1Q8WWY6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MBD3L1Q8WWY6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
MBD3L1Q8WWY6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
MBD3L1Q8WWY6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
MBD3L1Q8WWY6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MBD3L1Q8WWY6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MBD3L1Q8WWY6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MBD3L1Q8WWY6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD3L1Q8WWY6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD3L1Q8WWY6 SMPD5-203ENST00000639008 1464 ntBASIC17.57■□□□□ 0.4
MBD3L1Q8WWY6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD3L1Q8WWY6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.57■□□□□ 0.4
MBD3L1Q8WWY6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
MBD3L1Q8WWY6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.57■□□□□ 0.4
MBD3L1Q8WWY6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD3L1Q8WWY6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD3L1Q8WWY6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.57■□□□□ 0.4
MBD3L1Q8WWY6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MBD3L1Q8WWY6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
MBD3L1Q8WWY6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.57■□□□□ 0.4
MBD3L1Q8WWY6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD3L1Q8WWY6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD3L1Q8WWY6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
MBD3L1Q8WWY6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD3L1Q8WWY6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.56■□□□□ 0.4
MBD3L1Q8WWY6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
MBD3L1Q8WWY6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD3L1Q8WWY6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD3L1Q8WWY6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.56■□□□□ 0.4
MBD3L1Q8WWY6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.56■□□□□ 0.4
MBD3L1Q8WWY6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.56■□□□□ 0.4
MBD3L1Q8WWY6 AC080038.3-201ENST00000623346 1952 ntBASIC17.56■□□□□ 0.4
MBD3L1Q8WWY6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD3L1Q8WWY6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MBD3L1Q8WWY6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MBD3L1Q8WWY6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.56■□□□□ 0.4
MBD3L1Q8WWY6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MBD3L1Q8WWY6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.56■□□□□ 0.4
MBD3L1Q8WWY6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD3L1Q8WWY6 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.55■□□□□ 0.4
MBD3L1Q8WWY6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MBD3L1Q8WWY6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
MBD3L1Q8WWY6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.55■□□□□ 0.4
MBD3L1Q8WWY6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MBD3L1Q8WWY6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
MBD3L1Q8WWY6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MBD3L1Q8WWY6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.55■□□□□ 0.4
MBD3L1Q8WWY6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MBD3L1Q8WWY6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MBD3L1Q8WWY6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MBD3L1Q8WWY6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
MBD3L1Q8WWY6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MBD3L1Q8WWY6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MBD3L1Q8WWY6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.55■□□□□ 0.4
MBD3L1Q8WWY6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
MBD3L1Q8WWY6 AC090877.2-201ENST00000558441 1738 ntBASIC17.55■□□□□ 0.4
MBD3L1Q8WWY6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.55■□□□□ 0.4
MBD3L1Q8WWY6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MBD3L1Q8WWY6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
MBD3L1Q8WWY6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MBD3L1Q8WWY6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.54■□□□□ 0.4
MBD3L1Q8WWY6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.54■□□□□ 0.4
MBD3L1Q8WWY6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.54■□□□□ 0.4
MBD3L1Q8WWY6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
MBD3L1Q8WWY6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
MBD3L1Q8WWY6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MBD3L1Q8WWY6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
MBD3L1Q8WWY6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MBD3L1Q8WWY6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MBD3L1Q8WWY6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.54■□□□□ 0.4
MBD3L1Q8WWY6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
MBD3L1Q8WWY6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MBD3L1Q8WWY6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MBD3L1Q8WWY6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MBD3L1Q8WWY6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MBD3L1Q8WWY6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.53■□□□□ 0.4
MBD3L1Q8WWY6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MBD3L1Q8WWY6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
MBD3L1Q8WWY6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
MBD3L1Q8WWY6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MBD3L1Q8WWY6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.53■□□□□ 0.4
MBD3L1Q8WWY6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MBD3L1Q8WWY6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
MBD3L1Q8WWY6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
MBD3L1Q8WWY6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MBD3L1Q8WWY6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms