Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF217Q8TC41 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RNF217Q8TC41 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF217Q8TC41 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RNF217Q8TC41 AC141586.4-201ENST00000624558 1573 ntBASIC21.31■■□□□ 1
RNF217Q8TC41 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RNF217Q8TC41 AL137060.1-201ENST00000618151 2648 ntBASIC21.3■■□□□ 1
RNF217Q8TC41 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF217Q8TC41 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF217Q8TC41 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
RNF217Q8TC41 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.3■■□□□ 1
RNF217Q8TC41 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF217Q8TC41 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF217Q8TC41 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.3■■□□□ 1
RNF217Q8TC41 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RNF217Q8TC41 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
RNF217Q8TC41 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF217Q8TC41 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RNF217Q8TC41 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.29■■□□□ 1
RNF217Q8TC41 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF217Q8TC41 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
RNF217Q8TC41 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.29■■□□□ 1
RNF217Q8TC41 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RNF217Q8TC41 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RNF217Q8TC41 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF217Q8TC41 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF217Q8TC41 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF217Q8TC41 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF217Q8TC41 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.28■■□□□ 1
RNF217Q8TC41 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF217Q8TC41 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RNF217Q8TC41 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RNF217Q8TC41 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF217Q8TC41 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF217Q8TC41 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RNF217Q8TC41 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF217Q8TC41 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.28■■□□□ 1
RNF217Q8TC41 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.28■■□□□ 1
RNF217Q8TC41 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF217Q8TC41 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF217Q8TC41 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.28■■□□□ 1
RNF217Q8TC41 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
RNF217Q8TC41 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.28■■□□□ 1
RNF217Q8TC41 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
RNF217Q8TC41 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RNF217Q8TC41 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
RNF217Q8TC41 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.27■■□□□ 1
RNF217Q8TC41 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.27■■□□□ 1
RNF217Q8TC41 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.27■■□□□ 1
RNF217Q8TC41 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.27■■□□□ 1
RNF217Q8TC41 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.27■■□□□ 1
RNF217Q8TC41 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.27■■□□□ 1
RNF217Q8TC41 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.27■■□□□ 1
RNF217Q8TC41 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
RNF217Q8TC41 AC007952.6-201ENST00000573168 2673 ntBASIC21.27■■□□□ 1
RNF217Q8TC41 AC003957.1-201ENST00000625108 2673 ntBASIC21.27■■□□□ 1
RNF217Q8TC41 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.26■□□□□ 0.99
RNF217Q8TC41 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF217Q8TC41 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF217Q8TC41 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF217Q8TC41 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF217Q8TC41 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF217Q8TC41 AC004812.2-201ENST00000611079 2094 ntBASIC21.26■□□□□ 0.99
RNF217Q8TC41 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF217Q8TC41 AC129492.7-201ENST00000622992 756 ntBASIC21.26■□□□□ 0.99
RNF217Q8TC41 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF217Q8TC41 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.26■□□□□ 0.99
RNF217Q8TC41 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RNF217Q8TC41 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF217Q8TC41 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF217Q8TC41 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF217Q8TC41 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
RNF217Q8TC41 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF217Q8TC41 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF217Q8TC41 KRT18P60-201ENST00000312876 1297 ntBASIC21.25■□□□□ 0.99
RNF217Q8TC41 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF217Q8TC41 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RNF217Q8TC41 AC087393.1-201ENST00000582896 145 ntBASIC21.25■□□□□ 0.99
RNF217Q8TC41 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.25■□□□□ 0.99
RNF217Q8TC41 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF217Q8TC41 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF217Q8TC41 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF217Q8TC41 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF217Q8TC41 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
RNF217Q8TC41 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF217Q8TC41 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF217Q8TC41 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.24■□□□□ 0.99
RNF217Q8TC41 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF217Q8TC41 DUX4L18-201ENST00000553347 1267 ntBASIC21.24■□□□□ 0.99
RNF217Q8TC41 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF217Q8TC41 ABHD17AP5-201ENST00000580133 923 ntBASIC21.24■□□□□ 0.99
RNF217Q8TC41 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF217Q8TC41 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF217Q8TC41 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF217Q8TC41 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF217Q8TC41 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RNF217Q8TC41 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF217Q8TC41 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF217Q8TC41 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RNF217Q8TC41 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms