Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.57■■□□□ 1.36
SHKBP1Q8TBC3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.57■■□□□ 1.36
SHKBP1Q8TBC3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.57■■□□□ 1.36
SHKBP1Q8TBC3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SHKBP1Q8TBC3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.57■■□□□ 1.36
SHKBP1Q8TBC3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.57■■□□□ 1.36
SHKBP1Q8TBC3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SHKBP1Q8TBC3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SHKBP1Q8TBC3 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.57■■□□□ 1.36
SHKBP1Q8TBC3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SHKBP1Q8TBC3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.57■■□□□ 1.36
SHKBP1Q8TBC3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SHKBP1Q8TBC3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SHKBP1Q8TBC3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SHKBP1Q8TBC3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SHKBP1Q8TBC3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SHKBP1Q8TBC3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SHKBP1Q8TBC3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SHKBP1Q8TBC3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.56■■□□□ 1.36
SHKBP1Q8TBC3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SHKBP1Q8TBC3 AC104564.3-201ENST00000582367 638 ntBASIC23.56■■□□□ 1.36
SHKBP1Q8TBC3 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.56■■□□□ 1.36
SHKBP1Q8TBC3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SHKBP1Q8TBC3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
SHKBP1Q8TBC3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
SHKBP1Q8TBC3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SHKBP1Q8TBC3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
SHKBP1Q8TBC3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.55■■□□□ 1.36
SHKBP1Q8TBC3 AC141586.4-201ENST00000624558 1573 ntBASIC23.55■■□□□ 1.36
SHKBP1Q8TBC3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.55■■□□□ 1.36
SHKBP1Q8TBC3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.55■■□□□ 1.36
SHKBP1Q8TBC3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SHKBP1Q8TBC3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.55■■□□□ 1.36
SHKBP1Q8TBC3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
SHKBP1Q8TBC3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SHKBP1Q8TBC3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.55■■□□□ 1.36
SHKBP1Q8TBC3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SHKBP1Q8TBC3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.54■■□□□ 1.36
SHKBP1Q8TBC3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.54■■□□□ 1.36
SHKBP1Q8TBC3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
SHKBP1Q8TBC3 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.54■■□□□ 1.36
SHKBP1Q8TBC3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.54■■□□□ 1.36
SHKBP1Q8TBC3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.54■■□□□ 1.36
SHKBP1Q8TBC3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.54■■□□□ 1.36
SHKBP1Q8TBC3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SHKBP1Q8TBC3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
SHKBP1Q8TBC3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SHKBP1Q8TBC3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.53■■□□□ 1.36
SHKBP1Q8TBC3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SHKBP1Q8TBC3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.53■■□□□ 1.36
SHKBP1Q8TBC3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.53■■□□□ 1.36
SHKBP1Q8TBC3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
SHKBP1Q8TBC3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SHKBP1Q8TBC3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SHKBP1Q8TBC3 AC133561.1-201ENST00000568600 2415 ntBASIC23.53■■□□□ 1.36
SHKBP1Q8TBC3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SHKBP1Q8TBC3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
SHKBP1Q8TBC3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHKBP1Q8TBC3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.52■■□□□ 1.36
SHKBP1Q8TBC3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHKBP1Q8TBC3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHKBP1Q8TBC3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
SHKBP1Q8TBC3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.52■■□□□ 1.36
SHKBP1Q8TBC3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SHKBP1Q8TBC3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHKBP1Q8TBC3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.52■■□□□ 1.36
SHKBP1Q8TBC3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SHKBP1Q8TBC3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHKBP1Q8TBC3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
SHKBP1Q8TBC3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.51■■□□□ 1.35
SHKBP1Q8TBC3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.51■■□□□ 1.35
SHKBP1Q8TBC3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHKBP1Q8TBC3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHKBP1Q8TBC3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SHKBP1Q8TBC3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SHKBP1Q8TBC3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.5■■□□□ 1.35
SHKBP1Q8TBC3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.5■■□□□ 1.35
SHKBP1Q8TBC3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SHKBP1Q8TBC3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SHKBP1Q8TBC3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.5■■□□□ 1.35
SHKBP1Q8TBC3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SHKBP1Q8TBC3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.49■■□□□ 1.35
SHKBP1Q8TBC3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.49■■□□□ 1.35
SHKBP1Q8TBC3 SLC47A1P1-202ENST00000449666 945 ntBASIC23.49■■□□□ 1.35
SHKBP1Q8TBC3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SHKBP1Q8TBC3 AL162430.1-201ENST00000480705 870 ntBASIC23.49■■□□□ 1.35
SHKBP1Q8TBC3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SHKBP1Q8TBC3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.49■■□□□ 1.35
SHKBP1Q8TBC3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.48■■□□□ 1.35
SHKBP1Q8TBC3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SHKBP1Q8TBC3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.48■■□□□ 1.35
SHKBP1Q8TBC3 AC126544.1-201ENST00000580842 1059 ntBASIC23.48■■□□□ 1.35
SHKBP1Q8TBC3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SHKBP1Q8TBC3 AC138932.3-201ENST00000567634 1902 ntBASIC23.48■■□□□ 1.35
SHKBP1Q8TBC3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.48■■□□□ 1.35
SHKBP1Q8TBC3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SHKBP1Q8TBC3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.48■■□□□ 1.35
SHKBP1Q8TBC3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SHKBP1Q8TBC3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SHKBP1Q8TBC3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms