Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC168Q8NDH2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC168Q8NDH2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC168Q8NDH2 AC069152.1-201ENST00000438030 544 ntBASIC18.98■□□□□ 0.63
CCDC168Q8NDH2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC168Q8NDH2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC168Q8NDH2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC168Q8NDH2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CCDC168Q8NDH2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CCDC168Q8NDH2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC168Q8NDH2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC168Q8NDH2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC168Q8NDH2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.98■□□□□ 0.63
CCDC168Q8NDH2 KRT18P11-201ENST00000435214 1283 ntBASIC18.98■□□□□ 0.63
CCDC168Q8NDH2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC168Q8NDH2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CCDC168Q8NDH2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC168Q8NDH2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC168Q8NDH2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC168Q8NDH2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC168Q8NDH2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC168Q8NDH2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC168Q8NDH2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC168Q8NDH2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC168Q8NDH2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC168Q8NDH2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC168Q8NDH2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC168Q8NDH2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC168Q8NDH2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC168Q8NDH2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC168Q8NDH2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC168Q8NDH2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC168Q8NDH2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC168Q8NDH2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC168Q8NDH2 AC083906.2-201ENST00000511578 360 ntBASIC18.96■□□□□ 0.63
CCDC168Q8NDH2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.96■□□□□ 0.63
CCDC168Q8NDH2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC168Q8NDH2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC168Q8NDH2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC168Q8NDH2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC168Q8NDH2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC168Q8NDH2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CCDC168Q8NDH2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CCDC168Q8NDH2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC168Q8NDH2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC168Q8NDH2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CCDC168Q8NDH2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC168Q8NDH2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC168Q8NDH2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC168Q8NDH2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC168Q8NDH2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC168Q8NDH2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC168Q8NDH2 AL138781.1-201ENST00000566567 1274 ntBASIC18.95■□□□□ 0.62
CCDC168Q8NDH2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC168Q8NDH2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC168Q8NDH2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC168Q8NDH2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC168Q8NDH2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
CCDC168Q8NDH2 AP004607.4-201ENST00000530158 1459 ntBASIC18.94■□□□□ 0.62
CCDC168Q8NDH2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC168Q8NDH2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC168Q8NDH2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC168Q8NDH2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC168Q8NDH2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC168Q8NDH2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC168Q8NDH2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC168Q8NDH2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC168Q8NDH2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
CCDC168Q8NDH2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC168Q8NDH2 FAM201B-201ENST00000458407 597 ntBASIC18.93■□□□□ 0.62
CCDC168Q8NDH2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC168Q8NDH2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC168Q8NDH2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC168Q8NDH2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC168Q8NDH2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC168Q8NDH2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC168Q8NDH2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCDC168Q8NDH2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC168Q8NDH2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC168Q8NDH2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC168Q8NDH2 AL050303.2-201ENST00000619798 666 ntBASIC18.92■□□□□ 0.62
CCDC168Q8NDH2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
CCDC168Q8NDH2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC168Q8NDH2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC168Q8NDH2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC168Q8NDH2 SLC29A4P1-201ENST00000398760 971 ntBASIC18.91■□□□□ 0.62
CCDC168Q8NDH2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC168Q8NDH2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CCDC168Q8NDH2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC168Q8NDH2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CCDC168Q8NDH2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC168Q8NDH2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC168Q8NDH2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC168Q8NDH2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC168Q8NDH2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC168Q8NDH2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC168Q8NDH2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC168Q8NDH2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC168Q8NDH2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC168Q8NDH2 AC133637.1-201ENST00000624115 1537 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms