Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF39Q8N4T4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF39Q8N4T4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF39Q8N4T4 AC024257.2-201ENST00000549699 147 ntBASIC21.24■□□□□ 0.99
ARHGEF39Q8N4T4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF39Q8N4T4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF39Q8N4T4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.24■□□□□ 0.99
ARHGEF39Q8N4T4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ARHGEF39Q8N4T4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ARHGEF39Q8N4T4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.23■□□□□ 0.99
ARHGEF39Q8N4T4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ARHGEF39Q8N4T4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ARHGEF39Q8N4T4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.23■□□□□ 0.99
ARHGEF39Q8N4T4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ARHGEF39Q8N4T4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.23■□□□□ 0.99
ARHGEF39Q8N4T4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.23■□□□□ 0.99
ARHGEF39Q8N4T4 AL031432.3-201ENST00000607698 485 ntBASIC21.23■□□□□ 0.99
ARHGEF39Q8N4T4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.23■□□□□ 0.99
ARHGEF39Q8N4T4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ARHGEF39Q8N4T4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.23■□□□□ 0.99
ARHGEF39Q8N4T4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
ARHGEF39Q8N4T4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ARHGEF39Q8N4T4 AC135279.3-201ENST00000610945 1311 ntBASIC21.23■□□□□ 0.99
ARHGEF39Q8N4T4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ARHGEF39Q8N4T4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ARHGEF39Q8N4T4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.22■□□□□ 0.99
ARHGEF39Q8N4T4 LINC01529-204ENST00000636474 1715 ntBASIC21.22■□□□□ 0.99
ARHGEF39Q8N4T4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.22■□□□□ 0.99
ARHGEF39Q8N4T4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARHGEF39Q8N4T4 AL499627.2-201ENST00000606283 725 ntBASIC21.22■□□□□ 0.99
ARHGEF39Q8N4T4 AC011298.3-201ENST00000615796 283 ntBASIC21.22■□□□□ 0.99
ARHGEF39Q8N4T4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARHGEF39Q8N4T4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ARHGEF39Q8N4T4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARHGEF39Q8N4T4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
ARHGEF39Q8N4T4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.22■□□□□ 0.99
ARHGEF39Q8N4T4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.22■□□□□ 0.99
ARHGEF39Q8N4T4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ARHGEF39Q8N4T4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ARHGEF39Q8N4T4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.21■□□□□ 0.99
ARHGEF39Q8N4T4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ARHGEF39Q8N4T4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
ARHGEF39Q8N4T4 ANOS2P-203ENST00000472227 1816 ntBASIC21.21■□□□□ 0.99
ARHGEF39Q8N4T4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.21■□□□□ 0.99
ARHGEF39Q8N4T4 PBX2P1-201ENST00000493219 1291 ntBASIC21.21■□□□□ 0.99
ARHGEF39Q8N4T4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.21■□□□□ 0.99
ARHGEF39Q8N4T4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.21■□□□□ 0.99
ARHGEF39Q8N4T4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ARHGEF39Q8N4T4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ARHGEF39Q8N4T4 AC092068.2-201ENST00000590491 1708 ntBASIC21.21■□□□□ 0.99
ARHGEF39Q8N4T4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.2■□□□□ 0.98
ARHGEF39Q8N4T4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ARHGEF39Q8N4T4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ARHGEF39Q8N4T4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ARHGEF39Q8N4T4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.2■□□□□ 0.98
ARHGEF39Q8N4T4 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.2■□□□□ 0.98
ARHGEF39Q8N4T4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ARHGEF39Q8N4T4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
ARHGEF39Q8N4T4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
ARHGEF39Q8N4T4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.2■□□□□ 0.98
ARHGEF39Q8N4T4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ARHGEF39Q8N4T4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.19■□□□□ 0.98
ARHGEF39Q8N4T4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.19■□□□□ 0.98
ARHGEF39Q8N4T4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.19■□□□□ 0.98
ARHGEF39Q8N4T4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.19■□□□□ 0.98
ARHGEF39Q8N4T4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARHGEF39Q8N4T4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARHGEF39Q8N4T4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARHGEF39Q8N4T4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.19■□□□□ 0.98
ARHGEF39Q8N4T4 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.19■□□□□ 0.98
ARHGEF39Q8N4T4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.19■□□□□ 0.98
ARHGEF39Q8N4T4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ARHGEF39Q8N4T4 pRNA.6-201ENST00000610482 90 ntBASIC21.19■□□□□ 0.98
ARHGEF39Q8N4T4 pRNA.5-201ENST00000612139 90 ntBASIC21.19■□□□□ 0.98
ARHGEF39Q8N4T4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.19■□□□□ 0.98
ARHGEF39Q8N4T4 pRNA.11-201ENST00000618423 90 ntBASIC21.19■□□□□ 0.98
ARHGEF39Q8N4T4 pRNA.13-201ENST00000619112 90 ntBASIC21.19■□□□□ 0.98
ARHGEF39Q8N4T4 AC136469.2-201ENST00000623944 1028 ntBASIC21.19■□□□□ 0.98
ARHGEF39Q8N4T4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARHGEF39Q8N4T4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ARHGEF39Q8N4T4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ARHGEF39Q8N4T4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.18■□□□□ 0.98
ARHGEF39Q8N4T4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
ARHGEF39Q8N4T4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.18■□□□□ 0.98
ARHGEF39Q8N4T4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
ARHGEF39Q8N4T4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
ARHGEF39Q8N4T4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ARHGEF39Q8N4T4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.18■□□□□ 0.98
ARHGEF39Q8N4T4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.18■□□□□ 0.98
ARHGEF39Q8N4T4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF39Q8N4T4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF39Q8N4T4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF39Q8N4T4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF39Q8N4T4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.17■□□□□ 0.98
ARHGEF39Q8N4T4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.17■□□□□ 0.98
ARHGEF39Q8N4T4 MIR4767-201ENST00000582827 78 ntBASIC21.17■□□□□ 0.98
ARHGEF39Q8N4T4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.17■□□□□ 0.98
ARHGEF39Q8N4T4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF39Q8N4T4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF39Q8N4T4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms