Protein–RNA interactions for Protein: Q8N448

LNX2, Ligand of Numb protein X 2, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX2Q8N448 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LNX2Q8N448 ESRRAP2-201ENST00000418437 1549 ntBASIC20.23■□□□□ 0.83
LNX2Q8N448 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LNX2Q8N448 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LNX2Q8N448 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LNX2Q8N448 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LNX2Q8N448 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.23■□□□□ 0.83
LNX2Q8N448 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.23■□□□□ 0.83
LNX2Q8N448 BHLHE23-202ENST00000612929 1109 ntBASIC20.23■□□□□ 0.83
LNX2Q8N448 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
LNX2Q8N448 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LNX2Q8N448 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LNX2Q8N448 CLDN5-201ENST00000403084 2357 ntBASIC20.22■□□□□ 0.83
LNX2Q8N448 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LNX2Q8N448 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LNX2Q8N448 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LNX2Q8N448 PVT1_1.1-201ENST00000615125 194 ntBASIC20.22■□□□□ 0.83
LNX2Q8N448 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
LNX2Q8N448 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.22■□□□□ 0.83
LNX2Q8N448 LINC00565-201ENST00000562710 2331 ntBASIC20.22■□□□□ 0.83
LNX2Q8N448 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.22■□□□□ 0.83
LNX2Q8N448 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LNX2Q8N448 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LNX2Q8N448 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LNX2Q8N448 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LNX2Q8N448 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LNX2Q8N448 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.21■□□□□ 0.83
LNX2Q8N448 ATP5G2P3-201ENST00000429083 425 ntBASIC20.21■□□□□ 0.83
LNX2Q8N448 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.21■□□□□ 0.83
LNX2Q8N448 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LNX2Q8N448 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.21■□□□□ 0.83
LNX2Q8N448 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LNX2Q8N448 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.21■□□□□ 0.83
LNX2Q8N448 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.21■□□□□ 0.83
LNX2Q8N448 AC127496.7-201ENST00000625110 1798 ntBASIC20.21■□□□□ 0.83
LNX2Q8N448 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.21■□□□□ 0.83
LNX2Q8N448 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.21■□□□□ 0.83
LNX2Q8N448 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LNX2Q8N448 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.2■□□□□ 0.82
LNX2Q8N448 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.2■□□□□ 0.82
LNX2Q8N448 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LNX2Q8N448 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
LNX2Q8N448 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LNX2Q8N448 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LNX2Q8N448 AC004987.1-201ENST00000428627 508 ntBASIC20.2■□□□□ 0.82
LNX2Q8N448 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
LNX2Q8N448 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LNX2Q8N448 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LNX2Q8N448 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LNX2Q8N448 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LNX2Q8N448 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
LNX2Q8N448 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LNX2Q8N448 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
LNX2Q8N448 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LNX2Q8N448 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LNX2Q8N448 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
LNX2Q8N448 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LNX2Q8N448 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.19■□□□□ 0.82
LNX2Q8N448 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LNX2Q8N448 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.19■□□□□ 0.82
LNX2Q8N448 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LNX2Q8N448 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LNX2Q8N448 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.18■□□□□ 0.82
LNX2Q8N448 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LNX2Q8N448 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LNX2Q8N448 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LNX2Q8N448 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LNX2Q8N448 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.18■□□□□ 0.82
LNX2Q8N448 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.18■□□□□ 0.82
LNX2Q8N448 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.18■□□□□ 0.82
LNX2Q8N448 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LNX2Q8N448 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LNX2Q8N448 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LNX2Q8N448 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.17■□□□□ 0.82
LNX2Q8N448 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.17■□□□□ 0.82
LNX2Q8N448 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.17■□□□□ 0.82
LNX2Q8N448 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
LNX2Q8N448 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.17■□□□□ 0.82
LNX2Q8N448 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LNX2Q8N448 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.17■□□□□ 0.82
LNX2Q8N448 AC242852.2-201ENST00000615738 1807 ntBASIC20.17■□□□□ 0.82
LNX2Q8N448 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LNX2Q8N448 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LNX2Q8N448 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
LNX2Q8N448 AL353803.4-201ENST00000565882 1934 ntBASIC20.17■□□□□ 0.82
LNX2Q8N448 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LNX2Q8N448 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
LNX2Q8N448 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LNX2Q8N448 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
LNX2Q8N448 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LNX2Q8N448 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.16■□□□□ 0.82
LNX2Q8N448 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LNX2Q8N448 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LNX2Q8N448 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.16■□□□□ 0.82
LNX2Q8N448 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.16■□□□□ 0.82
LNX2Q8N448 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
LNX2Q8N448 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LNX2Q8N448 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LNX2Q8N448 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LNX2Q8N448 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms