Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 AL161729.1-201ENST00000604104 1402 ntBASIC33.82■■■■□ 3.01
ABCA6Q8N139 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC33.82■■■■□ 3
ABCA6Q8N139 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC33.82■■■■□ 3
ABCA6Q8N139 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC33.82■■■■□ 3
ABCA6Q8N139 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC33.82■■■■□ 3
ABCA6Q8N139 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC33.82■■■■□ 3
ABCA6Q8N139 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC33.82■■■■□ 3
ABCA6Q8N139 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC33.82■■■■□ 3
ABCA6Q8N139 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC33.82■■■■□ 3
ABCA6Q8N139 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC33.81■■■■□ 3
ABCA6Q8N139 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
ABCA6Q8N139 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC33.81■■■■□ 3
ABCA6Q8N139 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC33.81■■■■□ 3
ABCA6Q8N139 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC33.8■■■■□ 3
ABCA6Q8N139 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC33.8■■■■□ 3
ABCA6Q8N139 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC33.8■■■■□ 3
ABCA6Q8N139 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC33.8■■■■□ 3
ABCA6Q8N139 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC33.8■■■■□ 3
ABCA6Q8N139 MPST-204ENST00000404393 1329 ntTSL 5 BASIC33.79■■■■□ 3
ABCA6Q8N139 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC33.79■■■■□ 3
ABCA6Q8N139 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC33.79■■■■□ 3
ABCA6Q8N139 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC33.79■■■■□ 3
ABCA6Q8N139 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC33.79■■■■□ 3
ABCA6Q8N139 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC33.79■■■■□ 3
ABCA6Q8N139 AC091060.1-201ENST00000623524 1766 ntBASIC33.79■■■■□ 3
ABCA6Q8N139 ALDH1A3-203ENST00000557963 1670 ntBASIC33.79■■■■□ 3
ABCA6Q8N139 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC33.79■■■■□ 3
ABCA6Q8N139 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
ABCA6Q8N139 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC33.79■■■■□ 3
ABCA6Q8N139 AC016769.1-201ENST00000409132 1010 ntBASIC33.79■■■■□ 3
ABCA6Q8N139 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC33.79■■■■□ 3
ABCA6Q8N139 EI24-204ENST00000527235 1625 ntTSL 5 BASIC33.79■■■■□ 3
ABCA6Q8N139 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC33.78■■■■□ 3
ABCA6Q8N139 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC33.78■■■■□ 3
ABCA6Q8N139 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC33.78■■■■□ 3
ABCA6Q8N139 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC33.78■■■■□ 3
ABCA6Q8N139 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC33.78■■■■□ 3
ABCA6Q8N139 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC33.78■■■■□ 3
ABCA6Q8N139 DBI-210ENST00000542275 757 ntTSL 5 BASIC33.78■■■■□ 3
ABCA6Q8N139 AC137761.2-201ENST00000561729 223 ntBASIC33.78■■■■□ 3
ABCA6Q8N139 AC145350.3-201ENST00000569033 163 ntBASIC33.78■■■■□ 3
ABCA6Q8N139 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC33.78■■■■□ 3
ABCA6Q8N139 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC33.77■■■■□ 3
ABCA6Q8N139 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC33.77■■■■□ 3
ABCA6Q8N139 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC33.77■■■■□ 3
ABCA6Q8N139 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC33.76■■■■□ 3
ABCA6Q8N139 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC33.76■■■■□ 3
ABCA6Q8N139 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
ABCA6Q8N139 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC33.76■■■□□ 2.99
ABCA6Q8N139 HSCB-202ENST00000398941 955 ntTSL 2 BASIC33.75■■■□□ 2.99
ABCA6Q8N139 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC33.75■■■□□ 2.99
ABCA6Q8N139 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC33.75■■■□□ 2.99
ABCA6Q8N139 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC33.75■■■□□ 2.99
ABCA6Q8N139 STX7-201ENST00000367937 1090 ntTSL 5 BASIC33.75■■■□□ 2.99
ABCA6Q8N139 ESRRAP2-201ENST00000418437 1549 ntBASIC33.74■■■□□ 2.99
ABCA6Q8N139 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC33.74■■■□□ 2.99
ABCA6Q8N139 AL355802.2-201ENST00000402069 882 ntBASIC33.74■■■□□ 2.99
ABCA6Q8N139 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC33.74■■■□□ 2.99
ABCA6Q8N139 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC33.74■■■□□ 2.99
ABCA6Q8N139 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC33.74■■■□□ 2.99
ABCA6Q8N139 PPP1R14BP3-201ENST00000509033 445 ntBASIC33.74■■■□□ 2.99
ABCA6Q8N139 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC33.74■■■□□ 2.99
ABCA6Q8N139 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC33.74■■■□□ 2.99
ABCA6Q8N139 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC33.74■■■□□ 2.99
ABCA6Q8N139 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC33.73■■■□□ 2.99
ABCA6Q8N139 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC33.73■■■□□ 2.99
ABCA6Q8N139 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
ABCA6Q8N139 CROCCP5-201ENST00000436658 830 ntBASIC33.73■■■□□ 2.99
ABCA6Q8N139 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC33.73■■■□□ 2.99
ABCA6Q8N139 WWOX-218ENST00000627394 894 ntTSL 5 BASIC33.73■■■□□ 2.99
ABCA6Q8N139 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC33.73■■■□□ 2.99
ABCA6Q8N139 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC33.73■■■□□ 2.99
ABCA6Q8N139 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
ABCA6Q8N139 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC33.73■■■□□ 2.99
ABCA6Q8N139 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC33.72■■■□□ 2.99
ABCA6Q8N139 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
ABCA6Q8N139 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC33.72■■■□□ 2.99
ABCA6Q8N139 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
ABCA6Q8N139 GAS2L1P2-201ENST00000436355 1356 ntBASIC33.72■■■□□ 2.99
ABCA6Q8N139 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC33.72■■■□□ 2.99
ABCA6Q8N139 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC33.71■■■□□ 2.99
ABCA6Q8N139 AC026185.1-201ENST00000445748 174 ntBASIC33.71■■■□□ 2.99
ABCA6Q8N139 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC33.71■■■□□ 2.99
ABCA6Q8N139 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC33.71■■■□□ 2.99
ABCA6Q8N139 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
ABCA6Q8N139 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
ABCA6Q8N139 MIR663A-201ENST00000385250 93 ntBASIC33.71■■■□□ 2.99
ABCA6Q8N139 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC33.71■■■□□ 2.99
ABCA6Q8N139 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC33.71■■■□□ 2.99
ABCA6Q8N139 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC33.71■■■□□ 2.99
ABCA6Q8N139 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC33.71■■■□□ 2.99
ABCA6Q8N139 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC33.71■■■□□ 2.99
ABCA6Q8N139 GALNS-213ENST00000569433 723 ntTSL 3 BASIC33.71■■■□□ 2.99
ABCA6Q8N139 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC33.71■■■□□ 2.99
ABCA6Q8N139 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC33.7■■■□□ 2.99
ABCA6Q8N139 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC33.7■■■□□ 2.99
ABCA6Q8N139 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
ABCA6Q8N139 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC33.7■■■□□ 2.98
ABCA6Q8N139 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC33.7■■■□□ 2.98
ABCA6Q8N139 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC33.69■■■□□ 2.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms