Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
CHPFQ8IZ52 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.83■■□□□ 1.25
CHPFQ8IZ52 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.83■■□□□ 1.25
CHPFQ8IZ52 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHPFQ8IZ52 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.83■■□□□ 1.25
CHPFQ8IZ52 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.83■■□□□ 1.25
CHPFQ8IZ52 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHPFQ8IZ52 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CHPFQ8IZ52 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
CHPFQ8IZ52 AC138932.3-201ENST00000567634 1902 ntBASIC22.82■■□□□ 1.24
CHPFQ8IZ52 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CHPFQ8IZ52 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.82■■□□□ 1.24
CHPFQ8IZ52 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.82■■□□□ 1.24
CHPFQ8IZ52 AC087623.3-201ENST00000607047 1098 ntBASIC22.82■■□□□ 1.24
CHPFQ8IZ52 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CHPFQ8IZ52 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CHPFQ8IZ52 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CHPFQ8IZ52 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CHPFQ8IZ52 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.82■■□□□ 1.24
CHPFQ8IZ52 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.82■■□□□ 1.24
CHPFQ8IZ52 AC142381.3-201ENST00000568208 1670 ntBASIC22.81■■□□□ 1.24
CHPFQ8IZ52 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.81■■□□□ 1.24
CHPFQ8IZ52 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.81■■□□□ 1.24
CHPFQ8IZ52 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.81■■□□□ 1.24
CHPFQ8IZ52 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.81■■□□□ 1.24
CHPFQ8IZ52 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHPFQ8IZ52 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
CHPFQ8IZ52 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
CHPFQ8IZ52 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHPFQ8IZ52 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.8■■□□□ 1.24
CHPFQ8IZ52 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHPFQ8IZ52 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.8■■□□□ 1.24
CHPFQ8IZ52 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.8■■□□□ 1.24
CHPFQ8IZ52 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.8■■□□□ 1.24
CHPFQ8IZ52 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
CHPFQ8IZ52 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHPFQ8IZ52 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHPFQ8IZ52 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHPFQ8IZ52 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CHPFQ8IZ52 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CHPFQ8IZ52 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CHPFQ8IZ52 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CHPFQ8IZ52 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.78■■□□□ 1.24
CHPFQ8IZ52 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHPFQ8IZ52 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHPFQ8IZ52 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
CHPFQ8IZ52 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.78■■□□□ 1.24
CHPFQ8IZ52 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CHPFQ8IZ52 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.78■■□□□ 1.24
CHPFQ8IZ52 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHPFQ8IZ52 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.78■■□□□ 1.24
CHPFQ8IZ52 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CHPFQ8IZ52 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
CHPFQ8IZ52 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CHPFQ8IZ52 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.77■■□□□ 1.24
CHPFQ8IZ52 SLC47A1P1-202ENST00000449666 945 ntBASIC22.77■■□□□ 1.24
CHPFQ8IZ52 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.77■■□□□ 1.24
CHPFQ8IZ52 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CHPFQ8IZ52 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
CHPFQ8IZ52 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CHPFQ8IZ52 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
CHPFQ8IZ52 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CHPFQ8IZ52 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CHPFQ8IZ52 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CHPFQ8IZ52 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.75■■□□□ 1.23
CHPFQ8IZ52 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.75■■□□□ 1.23
CHPFQ8IZ52 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.75■■□□□ 1.23
CHPFQ8IZ52 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
CHPFQ8IZ52 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.75■■□□□ 1.23
CHPFQ8IZ52 AL162430.1-201ENST00000480705 870 ntBASIC22.75■■□□□ 1.23
CHPFQ8IZ52 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.75■■□□□ 1.23
CHPFQ8IZ52 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CHPFQ8IZ52 AC133637.1-201ENST00000624115 1537 ntBASIC22.75■■□□□ 1.23
CHPFQ8IZ52 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CHPFQ8IZ52 TSPY26P-201ENST00000476365 1326 ntBASIC22.75■■□□□ 1.23
CHPFQ8IZ52 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CHPFQ8IZ52 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.75■■□□□ 1.23
CHPFQ8IZ52 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CHPFQ8IZ52 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
CHPFQ8IZ52 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CHPFQ8IZ52 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.74■■□□□ 1.23
CHPFQ8IZ52 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CHPFQ8IZ52 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CHPFQ8IZ52 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.74■■□□□ 1.23
CHPFQ8IZ52 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.74■■□□□ 1.23
CHPFQ8IZ52 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.74■■□□□ 1.23
CHPFQ8IZ52 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.73■■□□□ 1.23
CHPFQ8IZ52 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
CHPFQ8IZ52 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.73■■□□□ 1.23
CHPFQ8IZ52 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.73■■□□□ 1.23
CHPFQ8IZ52 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.73■■□□□ 1.23
CHPFQ8IZ52 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CHPFQ8IZ52 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
CHPFQ8IZ52 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CHPFQ8IZ52 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CHPFQ8IZ52 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CHPFQ8IZ52 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHPFQ8IZ52 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHPFQ8IZ52 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHPFQ8IZ52 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms