Protein–RNA interactions for Protein: Q8IXR9

C12orf56, Uncharacterized protein C12orf56, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56Q8IXR9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
C12orf56Q8IXR9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
C12orf56Q8IXR9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.44■■□□□ 1.5
C12orf56Q8IXR9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
C12orf56Q8IXR9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
C12orf56Q8IXR9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
C12orf56Q8IXR9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
C12orf56Q8IXR9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
C12orf56Q8IXR9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
C12orf56Q8IXR9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
C12orf56Q8IXR9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.42■■□□□ 1.5
C12orf56Q8IXR9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.42■■□□□ 1.5
C12orf56Q8IXR9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
C12orf56Q8IXR9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
C12orf56Q8IXR9 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
C12orf56Q8IXR9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
C12orf56Q8IXR9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
C12orf56Q8IXR9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
C12orf56Q8IXR9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.41■■□□□ 1.5
C12orf56Q8IXR9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.41■■□□□ 1.5
C12orf56Q8IXR9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.41■■□□□ 1.5
C12orf56Q8IXR9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.41■■□□□ 1.5
C12orf56Q8IXR9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.41■■□□□ 1.5
C12orf56Q8IXR9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.41■■□□□ 1.5
C12orf56Q8IXR9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
C12orf56Q8IXR9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.41■■□□□ 1.5
C12orf56Q8IXR9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.41■■□□□ 1.5
C12orf56Q8IXR9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.41■■□□□ 1.5
C12orf56Q8IXR9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
C12orf56Q8IXR9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
C12orf56Q8IXR9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
C12orf56Q8IXR9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
C12orf56Q8IXR9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.39■■□□□ 1.49
C12orf56Q8IXR9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.39■■□□□ 1.49
C12orf56Q8IXR9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.39■■□□□ 1.49
C12orf56Q8IXR9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
C12orf56Q8IXR9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
C12orf56Q8IXR9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
C12orf56Q8IXR9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.38■■□□□ 1.49
C12orf56Q8IXR9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
C12orf56Q8IXR9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
C12orf56Q8IXR9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
C12orf56Q8IXR9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
C12orf56Q8IXR9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
C12orf56Q8IXR9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.38■■□□□ 1.49
C12orf56Q8IXR9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 AC241377.3-202ENST00000626088 1088 ntBASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 AC241585.3-202ENST00000628937 1088 ntBASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 AC245100.8-202ENST00000629247 1058 ntBASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.36■■□□□ 1.49
C12orf56Q8IXR9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.36■■□□□ 1.49
C12orf56Q8IXR9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.36■■□□□ 1.49
C12orf56Q8IXR9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.36■■□□□ 1.49
C12orf56Q8IXR9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.36■■□□□ 1.49
C12orf56Q8IXR9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.36■■□□□ 1.49
C12orf56Q8IXR9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.34■■□□□ 1.49
C12orf56Q8IXR9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.34■■□□□ 1.49
C12orf56Q8IXR9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
C12orf56Q8IXR9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
C12orf56Q8IXR9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
C12orf56Q8IXR9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.34■■□□□ 1.49
C12orf56Q8IXR9 AC131281.2-201ENST00000520478 145 ntBASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms