Protein–RNA interactions for Protein: Q8IXR9

C12orf56, Uncharacterized protein C12orf56, humanhuman

Predictions only

Length 622 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56Q8IXR9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
C12orf56Q8IXR9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
C12orf56Q8IXR9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.44■■□□□ 1.5
C12orf56Q8IXR9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
C12orf56Q8IXR9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
C12orf56Q8IXR9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
C12orf56Q8IXR9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
C12orf56Q8IXR9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
C12orf56Q8IXR9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
C12orf56Q8IXR9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
C12orf56Q8IXR9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.42■■□□□ 1.5
C12orf56Q8IXR9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.42■■□□□ 1.5
C12orf56Q8IXR9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
C12orf56Q8IXR9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
C12orf56Q8IXR9 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
C12orf56Q8IXR9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
C12orf56Q8IXR9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
C12orf56Q8IXR9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
C12orf56Q8IXR9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.41■■□□□ 1.5
C12orf56Q8IXR9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.41■■□□□ 1.5
C12orf56Q8IXR9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.41■■□□□ 1.5
C12orf56Q8IXR9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.41■■□□□ 1.5
C12orf56Q8IXR9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.41■■□□□ 1.5
C12orf56Q8IXR9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.41■■□□□ 1.5
C12orf56Q8IXR9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
C12orf56Q8IXR9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.41■■□□□ 1.5
C12orf56Q8IXR9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.41■■□□□ 1.5
C12orf56Q8IXR9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.41■■□□□ 1.5
C12orf56Q8IXR9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.4■■□□□ 1.5
C12orf56Q8IXR9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
C12orf56Q8IXR9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
C12orf56Q8IXR9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
C12orf56Q8IXR9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
C12orf56Q8IXR9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.39■■□□□ 1.49
C12orf56Q8IXR9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.39■■□□□ 1.49
C12orf56Q8IXR9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.39■■□□□ 1.49
C12orf56Q8IXR9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
C12orf56Q8IXR9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
C12orf56Q8IXR9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
C12orf56Q8IXR9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.38■■□□□ 1.49
C12orf56Q8IXR9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
C12orf56Q8IXR9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
C12orf56Q8IXR9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
C12orf56Q8IXR9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
C12orf56Q8IXR9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
C12orf56Q8IXR9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.38■■□□□ 1.49
C12orf56Q8IXR9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 AC241377.3-202ENST00000626088 1088 ntBASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 AC241585.3-202ENST00000628937 1088 ntBASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 AC245100.8-202ENST00000629247 1058 ntBASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
C12orf56Q8IXR9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.36■■□□□ 1.49
C12orf56Q8IXR9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.36■■□□□ 1.49
C12orf56Q8IXR9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.36■■□□□ 1.49
C12orf56Q8IXR9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.36■■□□□ 1.49
C12orf56Q8IXR9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.36■■□□□ 1.49
C12orf56Q8IXR9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.36■■□□□ 1.49
C12orf56Q8IXR9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
C12orf56Q8IXR9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.34■■□□□ 1.49
C12orf56Q8IXR9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.34■■□□□ 1.49
C12orf56Q8IXR9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
C12orf56Q8IXR9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
C12orf56Q8IXR9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
C12orf56Q8IXR9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.34■■□□□ 1.49
C12orf56Q8IXR9 AC131281.2-201ENST00000520478 145 ntBASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms