Protein–RNA interactions for Protein: Q8IWT3

CUL9, Cullin-9, humanhuman

Predictions only

Length 2,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUL9Q8IWT3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CUL9Q8IWT3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC23.28■■□□□ 1.32
CUL9Q8IWT3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC23.28■■□□□ 1.32
CUL9Q8IWT3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CUL9Q8IWT3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.28■■□□□ 1.32
CUL9Q8IWT3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CUL9Q8IWT3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.27■■□□□ 1.32
CUL9Q8IWT3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.27■■□□□ 1.32
CUL9Q8IWT3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CUL9Q8IWT3 MIR718-201ENST00000390190 70 ntBASIC23.27■■□□□ 1.32
CUL9Q8IWT3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.27■■□□□ 1.32
CUL9Q8IWT3 UNC93B5-201ENST00000530315 699 ntBASIC23.27■■□□□ 1.32
CUL9Q8IWT3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.27■■□□□ 1.32
CUL9Q8IWT3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.27■■□□□ 1.32
CUL9Q8IWT3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CUL9Q8IWT3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.27■■□□□ 1.32
CUL9Q8IWT3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.31
CUL9Q8IWT3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.26■■□□□ 1.31
CUL9Q8IWT3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
CUL9Q8IWT3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
CUL9Q8IWT3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC23.26■■□□□ 1.31
CUL9Q8IWT3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CUL9Q8IWT3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.26■■□□□ 1.31
CUL9Q8IWT3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CUL9Q8IWT3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
CUL9Q8IWT3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CUL9Q8IWT3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CUL9Q8IWT3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CUL9Q8IWT3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.25■■□□□ 1.31
CUL9Q8IWT3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.25■■□□□ 1.31
CUL9Q8IWT3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CUL9Q8IWT3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
CUL9Q8IWT3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC23.25■■□□□ 1.31
CUL9Q8IWT3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CUL9Q8IWT3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CUL9Q8IWT3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CUL9Q8IWT3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CUL9Q8IWT3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.25■■□□□ 1.31
CUL9Q8IWT3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CUL9Q8IWT3 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.25■■□□□ 1.31
CUL9Q8IWT3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CUL9Q8IWT3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CUL9Q8IWT3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CUL9Q8IWT3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CUL9Q8IWT3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CUL9Q8IWT3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.24■■□□□ 1.31
CUL9Q8IWT3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CUL9Q8IWT3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.24■■□□□ 1.31
CUL9Q8IWT3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CUL9Q8IWT3 FOXO3B-201ENST00000395675 1928 ntBASIC23.23■■□□□ 1.31
CUL9Q8IWT3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CUL9Q8IWT3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.23■■□□□ 1.31
CUL9Q8IWT3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
CUL9Q8IWT3 AL139393.2-201ENST00000608721 2025 ntBASIC23.23■■□□□ 1.31
CUL9Q8IWT3 AC009086.3-201ENST00000623486 1008 ntBASIC23.23■■□□□ 1.31
CUL9Q8IWT3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.23■■□□□ 1.31
CUL9Q8IWT3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CUL9Q8IWT3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.23■■□□□ 1.31
CUL9Q8IWT3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.22■■□□□ 1.31
CUL9Q8IWT3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC23.22■■□□□ 1.31
CUL9Q8IWT3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC23.22■■□□□ 1.31
CUL9Q8IWT3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.22■■□□□ 1.31
CUL9Q8IWT3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
CUL9Q8IWT3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CUL9Q8IWT3 AL449106.1-201ENST00000608517 1980 ntBASIC23.22■■□□□ 1.31
CUL9Q8IWT3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.22■■□□□ 1.31
CUL9Q8IWT3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.22■■□□□ 1.31
CUL9Q8IWT3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CUL9Q8IWT3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CUL9Q8IWT3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
CUL9Q8IWT3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.22■■□□□ 1.31
CUL9Q8IWT3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CUL9Q8IWT3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CUL9Q8IWT3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.21■■□□□ 1.31
CUL9Q8IWT3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC23.21■■□□□ 1.31
CUL9Q8IWT3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.21■■□□□ 1.31
CUL9Q8IWT3 AC133552.2-202ENST00000575694 574 ntBASIC23.21■■□□□ 1.31
CUL9Q8IWT3 MIR4758-201ENST00000577688 71 ntBASIC23.21■■□□□ 1.31
CUL9Q8IWT3 AC083880.1-201ENST00000608266 535 ntBASIC23.21■■□□□ 1.31
CUL9Q8IWT3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CUL9Q8IWT3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.21■■□□□ 1.31
CUL9Q8IWT3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CUL9Q8IWT3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.21■■□□□ 1.31
CUL9Q8IWT3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.21■■□□□ 1.31
CUL9Q8IWT3 REXO1L12P-201ENST00000622156 912 ntBASIC23.21■■□□□ 1.31
CUL9Q8IWT3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
CUL9Q8IWT3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CUL9Q8IWT3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CUL9Q8IWT3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC23.2■■□□□ 1.3
CUL9Q8IWT3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC23.2■■□□□ 1.3
CUL9Q8IWT3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CUL9Q8IWT3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
CUL9Q8IWT3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CUL9Q8IWT3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.2■■□□□ 1.3
CUL9Q8IWT3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.2■■□□□ 1.3
CUL9Q8IWT3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.2■■□□□ 1.3
CUL9Q8IWT3 pRNA.6-201ENST00000610482 90 ntBASIC23.2■■□□□ 1.3
CUL9Q8IWT3 pRNA.5-201ENST00000612139 90 ntBASIC23.2■■□□□ 1.3
CUL9Q8IWT3 pRNA.11-201ENST00000618423 90 ntBASIC23.2■■□□□ 1.3
CUL9Q8IWT3 pRNA.13-201ENST00000619112 90 ntBASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms