Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.95■□□□□ 0.94
CCDC71Q8IV32 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC71Q8IV32 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC71Q8IV32 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.95■□□□□ 0.94
CCDC71Q8IV32 MTDHP2-201ENST00000601468 714 ntBASIC20.95■□□□□ 0.94
CCDC71Q8IV32 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC71Q8IV32 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC71Q8IV32 AC011551.1-201ENST00000614101 683 ntBASIC20.95■□□□□ 0.94
CCDC71Q8IV32 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC71Q8IV32 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC71Q8IV32 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC71Q8IV32 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC71Q8IV32 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC71Q8IV32 AC092068.2-201ENST00000590491 1708 ntBASIC20.95■□□□□ 0.94
CCDC71Q8IV32 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CCDC71Q8IV32 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC71Q8IV32 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
CCDC71Q8IV32 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC71Q8IV32 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
CCDC71Q8IV32 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC71Q8IV32 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC71Q8IV32 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
CCDC71Q8IV32 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC71Q8IV32 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC71Q8IV32 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC71Q8IV32 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC71Q8IV32 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC71Q8IV32 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC71Q8IV32 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC71Q8IV32 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC71Q8IV32 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC71Q8IV32 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC71Q8IV32 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC71Q8IV32 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CCDC71Q8IV32 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.93■□□□□ 0.94
CCDC71Q8IV32 AL136116.3-201ENST00000402907 1138 ntBASIC20.93■□□□□ 0.94
CCDC71Q8IV32 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC71Q8IV32 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC71Q8IV32 AL117332.1-201ENST00000622628 974 ntBASIC20.93■□□□□ 0.94
CCDC71Q8IV32 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC71Q8IV32 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CCDC71Q8IV32 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC71Q8IV32 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC71Q8IV32 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC71Q8IV32 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC71Q8IV32 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
CCDC71Q8IV32 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC71Q8IV32 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC71Q8IV32 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC71Q8IV32 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC71Q8IV32 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CCDC71Q8IV32 LINC00526-201ENST00000581067 1875 ntBASIC20.92■□□□□ 0.94
CCDC71Q8IV32 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC71Q8IV32 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC71Q8IV32 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC71Q8IV32 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC71Q8IV32 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC71Q8IV32 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC71Q8IV32 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CCDC71Q8IV32 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC71Q8IV32 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC71Q8IV32 MIR638-201ENST00000385237 100 ntBASIC20.91■□□□□ 0.94
CCDC71Q8IV32 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC71Q8IV32 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC71Q8IV32 MIR6724-1-201ENST00000616420 92 ntBASIC20.91■□□□□ 0.94
CCDC71Q8IV32 MIR6724-2-201ENST00000616483 92 ntBASIC20.91■□□□□ 0.94
CCDC71Q8IV32 MIR6724-4-201ENST00000617390 92 ntBASIC20.91■□□□□ 0.94
CCDC71Q8IV32 MIR6724-3-201ENST00000622482 92 ntBASIC20.91■□□□□ 0.94
CCDC71Q8IV32 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC71Q8IV32 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC71Q8IV32 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC71Q8IV32 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CCDC71Q8IV32 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC71Q8IV32 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
CCDC71Q8IV32 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC71Q8IV32 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC71Q8IV32 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC71Q8IV32 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC71Q8IV32 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC71Q8IV32 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC71Q8IV32 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC71Q8IV32 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC71Q8IV32 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC71Q8IV32 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC71Q8IV32 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC71Q8IV32 GUSBP5-202ENST00000510805 1989 ntBASIC20.9■□□□□ 0.94
CCDC71Q8IV32 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC71Q8IV32 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
CCDC71Q8IV32 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC71Q8IV32 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC71Q8IV32 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCDC71Q8IV32 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.89■□□□□ 0.94
CCDC71Q8IV32 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC71Q8IV32 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.94
CCDC71Q8IV32 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
CCDC71Q8IV32 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC71Q8IV32 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CCDC71Q8IV32 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC71Q8IV32 MIR3621-201ENST00000580529 85 ntBASIC20.89■□□□□ 0.93
CCDC71Q8IV32 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms