Protein–RNA interactions for Protein: Q86YC2

PALB2, Partner and localizer of BRCA2, humanhuman

Predictions only

Length 1,186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2Q86YC2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
PALB2Q86YC2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
PALB2Q86YC2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.39■■□□□ 1.49
PALB2Q86YC2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PALB2Q86YC2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
PALB2Q86YC2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PALB2Q86YC2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.38■■□□□ 1.49
PALB2Q86YC2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PALB2Q86YC2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PALB2Q86YC2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PALB2Q86YC2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PALB2Q86YC2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PALB2Q86YC2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.38■■□□□ 1.49
PALB2Q86YC2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.38■■□□□ 1.49
PALB2Q86YC2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PALB2Q86YC2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
PALB2Q86YC2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PALB2Q86YC2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PALB2Q86YC2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PALB2Q86YC2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.38■■□□□ 1.49
PALB2Q86YC2 AL022069.1-201ENST00000568025 1636 ntBASIC24.38■■□□□ 1.49
PALB2Q86YC2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
PALB2Q86YC2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PALB2Q86YC2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PALB2Q86YC2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
PALB2Q86YC2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
PALB2Q86YC2 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.37■■□□□ 1.49
PALB2Q86YC2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
PALB2Q86YC2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24.37■■□□□ 1.49
PALB2Q86YC2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC24.37■■□□□ 1.49
PALB2Q86YC2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.37■■□□□ 1.49
PALB2Q86YC2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PALB2Q86YC2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PALB2Q86YC2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.37■■□□□ 1.49
PALB2Q86YC2 AL161729.1-201ENST00000604104 1402 ntBASIC24.36■■□□□ 1.49
PALB2Q86YC2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.36■■□□□ 1.49
PALB2Q86YC2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.36■■□□□ 1.49
PALB2Q86YC2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PALB2Q86YC2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PALB2Q86YC2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PALB2Q86YC2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.36■■□□□ 1.49
PALB2Q86YC2 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.36■■□□□ 1.49
PALB2Q86YC2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
PALB2Q86YC2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
PALB2Q86YC2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
PALB2Q86YC2 AC068473.5-201ENST00000616428 2072 ntBASIC24.35■■□□□ 1.49
PALB2Q86YC2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.35■■□□□ 1.49
PALB2Q86YC2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.35■■□□□ 1.49
PALB2Q86YC2 DUX4L19-201ENST00000557448 1267 ntBASIC24.35■■□□□ 1.49
PALB2Q86YC2 RARRES2P6-201ENST00000567333 442 ntBASIC24.35■■□□□ 1.49
PALB2Q86YC2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PALB2Q86YC2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PALB2Q86YC2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PALB2Q86YC2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.34■■□□□ 1.49
PALB2Q86YC2 SYT6-210ENST00000641643 1587 ntBASIC24.34■■□□□ 1.49
PALB2Q86YC2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.34■■□□□ 1.49
PALB2Q86YC2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PALB2Q86YC2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.34■■□□□ 1.49
PALB2Q86YC2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.34■■□□□ 1.49
PALB2Q86YC2 AL136967.2-201ENST00000623968 743 ntBASIC24.34■■□□□ 1.49
PALB2Q86YC2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
PALB2Q86YC2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
PALB2Q86YC2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PALB2Q86YC2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.34■■□□□ 1.49
PALB2Q86YC2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.33■■□□□ 1.49
PALB2Q86YC2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PALB2Q86YC2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
PALB2Q86YC2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PALB2Q86YC2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.33■■□□□ 1.49
PALB2Q86YC2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.33■■□□□ 1.49
PALB2Q86YC2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PALB2Q86YC2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.33■■□□□ 1.49
PALB2Q86YC2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
PALB2Q86YC2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PALB2Q86YC2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PALB2Q86YC2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.32■■□□□ 1.48
PALB2Q86YC2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.32■■□□□ 1.48
PALB2Q86YC2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC24.32■■□□□ 1.48
PALB2Q86YC2 AF213884.3-201ENST00000563833 479 ntBASIC24.32■■□□□ 1.48
PALB2Q86YC2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
PALB2Q86YC2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
PALB2Q86YC2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.32■■□□□ 1.48
PALB2Q86YC2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PALB2Q86YC2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
PALB2Q86YC2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PALB2Q86YC2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PALB2Q86YC2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.31■■□□□ 1.48
PALB2Q86YC2 AC105265.2-201ENST00000467189 838 ntBASIC24.31■■□□□ 1.48
PALB2Q86YC2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PALB2Q86YC2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
PALB2Q86YC2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.31■■□□□ 1.48
PALB2Q86YC2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PALB2Q86YC2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.31■■□□□ 1.48
PALB2Q86YC2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.31■■□□□ 1.48
PALB2Q86YC2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
PALB2Q86YC2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PALB2Q86YC2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PALB2Q86YC2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PALB2Q86YC2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
PALB2Q86YC2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms