Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.63■■■□□ 2.17
COL23A1Q86Y22 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
COL23A1Q86Y22 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
COL23A1Q86Y22 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
COL23A1Q86Y22 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
COL23A1Q86Y22 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
COL23A1Q86Y22 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
COL23A1Q86Y22 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
COL23A1Q86Y22 DBI-210ENST00000542275 757 ntTSL 5 BASIC28.62■■■□□ 2.17
COL23A1Q86Y22 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
COL23A1Q86Y22 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
COL23A1Q86Y22 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
COL23A1Q86Y22 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC28.61■■■□□ 2.17
COL23A1Q86Y22 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
COL23A1Q86Y22 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
COL23A1Q86Y22 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC28.61■■■□□ 2.17
COL23A1Q86Y22 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC28.61■■■□□ 2.17
COL23A1Q86Y22 AC105233.4-201ENST00000642045 216 ntBASIC28.61■■■□□ 2.17
COL23A1Q86Y22 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC28.61■■■□□ 2.17
COL23A1Q86Y22 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.61■■■□□ 2.17
COL23A1Q86Y22 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC28.61■■■□□ 2.17
COL23A1Q86Y22 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
COL23A1Q86Y22 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC28.6■■■□□ 2.17
COL23A1Q86Y22 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC28.6■■■□□ 2.17
COL23A1Q86Y22 CD37-213ENST00000598095 1598 ntTSL 2 BASIC28.6■■■□□ 2.17
COL23A1Q86Y22 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
COL23A1Q86Y22 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
COL23A1Q86Y22 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.6■■■□□ 2.17
COL23A1Q86Y22 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
COL23A1Q86Y22 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
COL23A1Q86Y22 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC28.59■■■□□ 2.17
COL23A1Q86Y22 LSR-205ENST00000427250 1606 ntTSL 2 BASIC28.59■■■□□ 2.17
COL23A1Q86Y22 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
COL23A1Q86Y22 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
COL23A1Q86Y22 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
COL23A1Q86Y22 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC28.59■■■□□ 2.17
COL23A1Q86Y22 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
COL23A1Q86Y22 AC006970.2-201ENST00000450065 779 ntBASIC28.59■■■□□ 2.17
COL23A1Q86Y22 OR2I1P-207ENST00000453522 948 ntBASIC28.59■■■□□ 2.17
COL23A1Q86Y22 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC28.59■■■□□ 2.17
COL23A1Q86Y22 AL499627.2-201ENST00000606283 725 ntBASIC28.59■■■□□ 2.17
COL23A1Q86Y22 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
COL23A1Q86Y22 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC28.58■■■□□ 2.17
COL23A1Q86Y22 NCF1B-203ENST00000435988 1254 ntBASIC28.58■■■□□ 2.17
COL23A1Q86Y22 BID-214ENST00000617586 542 ntTSL 5 BASIC28.58■■■□□ 2.17
COL23A1Q86Y22 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
COL23A1Q86Y22 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
COL23A1Q86Y22 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC28.58■■■□□ 2.17
COL23A1Q86Y22 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 AP004607.4-201ENST00000530158 1459 ntBASIC28.57■■■□□ 2.16
COL23A1Q86Y22 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC28.56■■■□□ 2.16
COL23A1Q86Y22 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC28.56■■■□□ 2.16
COL23A1Q86Y22 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC28.56■■■□□ 2.16
COL23A1Q86Y22 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC28.56■■■□□ 2.16
COL23A1Q86Y22 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC28.56■■■□□ 2.16
COL23A1Q86Y22 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC28.56■■■□□ 2.16
COL23A1Q86Y22 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC28.56■■■□□ 2.16
COL23A1Q86Y22 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
COL23A1Q86Y22 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
COL23A1Q86Y22 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC28.55■■■□□ 2.16
COL23A1Q86Y22 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
COL23A1Q86Y22 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC28.55■■■□□ 2.16
COL23A1Q86Y22 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC28.55■■■□□ 2.16
COL23A1Q86Y22 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
COL23A1Q86Y22 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
COL23A1Q86Y22 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
COL23A1Q86Y22 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
COL23A1Q86Y22 SHD-204ENST00000599689 1729 ntTSL 5 BASIC28.54■■■□□ 2.16
COL23A1Q86Y22 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
COL23A1Q86Y22 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC28.53■■■□□ 2.16
COL23A1Q86Y22 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
COL23A1Q86Y22 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
COL23A1Q86Y22 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
COL23A1Q86Y22 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
COL23A1Q86Y22 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
COL23A1Q86Y22 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC28.53■■■□□ 2.16
COL23A1Q86Y22 AC004854.2-201ENST00000608450 1441 ntBASIC28.52■■■□□ 2.16
COL23A1Q86Y22 TPRG1LP1-201ENST00000598702 760 ntBASIC28.52■■■□□ 2.16
COL23A1Q86Y22 WWOX-218ENST00000627394 894 ntTSL 5 BASIC28.52■■■□□ 2.16
COL23A1Q86Y22 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC28.52■■■□□ 2.16
COL23A1Q86Y22 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
COL23A1Q86Y22 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
COL23A1Q86Y22 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC28.52■■■□□ 2.16
COL23A1Q86Y22 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.16
COL23A1Q86Y22 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
COL23A1Q86Y22 COX20-201ENST00000366528 568 ntTSL 2 BASIC28.51■■■□□ 2.15
COL23A1Q86Y22 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
COL23A1Q86Y22 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms