Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.63■■■□□ 2.17
COL23A1Q86Y22 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
COL23A1Q86Y22 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
COL23A1Q86Y22 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
COL23A1Q86Y22 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
COL23A1Q86Y22 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
COL23A1Q86Y22 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
COL23A1Q86Y22 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
COL23A1Q86Y22 DBI-210ENST00000542275 757 ntTSL 5 BASIC28.62■■■□□ 2.17
COL23A1Q86Y22 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
COL23A1Q86Y22 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
COL23A1Q86Y22 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
COL23A1Q86Y22 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC28.61■■■□□ 2.17
COL23A1Q86Y22 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
COL23A1Q86Y22 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
COL23A1Q86Y22 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC28.61■■■□□ 2.17
COL23A1Q86Y22 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC28.61■■■□□ 2.17
COL23A1Q86Y22 AC105233.4-201ENST00000642045 216 ntBASIC28.61■■■□□ 2.17
COL23A1Q86Y22 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC28.61■■■□□ 2.17
COL23A1Q86Y22 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.61■■■□□ 2.17
COL23A1Q86Y22 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC28.61■■■□□ 2.17
COL23A1Q86Y22 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
COL23A1Q86Y22 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC28.6■■■□□ 2.17
COL23A1Q86Y22 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC28.6■■■□□ 2.17
COL23A1Q86Y22 CD37-213ENST00000598095 1598 ntTSL 2 BASIC28.6■■■□□ 2.17
COL23A1Q86Y22 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
COL23A1Q86Y22 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
COL23A1Q86Y22 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.6■■■□□ 2.17
COL23A1Q86Y22 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
COL23A1Q86Y22 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
COL23A1Q86Y22 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC28.59■■■□□ 2.17
COL23A1Q86Y22 LSR-205ENST00000427250 1606 ntTSL 2 BASIC28.59■■■□□ 2.17
COL23A1Q86Y22 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
COL23A1Q86Y22 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
COL23A1Q86Y22 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
COL23A1Q86Y22 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC28.59■■■□□ 2.17
COL23A1Q86Y22 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
COL23A1Q86Y22 AC006970.2-201ENST00000450065 779 ntBASIC28.59■■■□□ 2.17
COL23A1Q86Y22 OR2I1P-207ENST00000453522 948 ntBASIC28.59■■■□□ 2.17
COL23A1Q86Y22 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC28.59■■■□□ 2.17
COL23A1Q86Y22 AL499627.2-201ENST00000606283 725 ntBASIC28.59■■■□□ 2.17
COL23A1Q86Y22 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
COL23A1Q86Y22 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC28.58■■■□□ 2.17
COL23A1Q86Y22 NCF1B-203ENST00000435988 1254 ntBASIC28.58■■■□□ 2.17
COL23A1Q86Y22 BID-214ENST00000617586 542 ntTSL 5 BASIC28.58■■■□□ 2.17
COL23A1Q86Y22 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
COL23A1Q86Y22 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
COL23A1Q86Y22 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC28.58■■■□□ 2.17
COL23A1Q86Y22 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 AP004607.4-201ENST00000530158 1459 ntBASIC28.57■■■□□ 2.16
COL23A1Q86Y22 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
COL23A1Q86Y22 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC28.56■■■□□ 2.16
COL23A1Q86Y22 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC28.56■■■□□ 2.16
COL23A1Q86Y22 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC28.56■■■□□ 2.16
COL23A1Q86Y22 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC28.56■■■□□ 2.16
COL23A1Q86Y22 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC28.56■■■□□ 2.16
COL23A1Q86Y22 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC28.56■■■□□ 2.16
COL23A1Q86Y22 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC28.56■■■□□ 2.16
COL23A1Q86Y22 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
COL23A1Q86Y22 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
COL23A1Q86Y22 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC28.55■■■□□ 2.16
COL23A1Q86Y22 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
COL23A1Q86Y22 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC28.55■■■□□ 2.16
COL23A1Q86Y22 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC28.55■■■□□ 2.16
COL23A1Q86Y22 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
COL23A1Q86Y22 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
COL23A1Q86Y22 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
COL23A1Q86Y22 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
COL23A1Q86Y22 SHD-204ENST00000599689 1729 ntTSL 5 BASIC28.54■■■□□ 2.16
COL23A1Q86Y22 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
COL23A1Q86Y22 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC28.53■■■□□ 2.16
COL23A1Q86Y22 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
COL23A1Q86Y22 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
COL23A1Q86Y22 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
COL23A1Q86Y22 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
COL23A1Q86Y22 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
COL23A1Q86Y22 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC28.53■■■□□ 2.16
COL23A1Q86Y22 AC004854.2-201ENST00000608450 1441 ntBASIC28.52■■■□□ 2.16
COL23A1Q86Y22 TPRG1LP1-201ENST00000598702 760 ntBASIC28.52■■■□□ 2.16
COL23A1Q86Y22 WWOX-218ENST00000627394 894 ntTSL 5 BASIC28.52■■■□□ 2.16
COL23A1Q86Y22 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC28.52■■■□□ 2.16
COL23A1Q86Y22 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
COL23A1Q86Y22 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
COL23A1Q86Y22 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC28.52■■■□□ 2.16
COL23A1Q86Y22 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.16
COL23A1Q86Y22 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
COL23A1Q86Y22 COX20-201ENST00000366528 568 ntTSL 2 BASIC28.51■■■□□ 2.15
COL23A1Q86Y22 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
COL23A1Q86Y22 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms