Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 AC127496.7-201ENST00000625110 1798 ntBASIC23.06■■□□□ 1.28
CCDC25Q86WR0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC25Q86WR0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
CCDC25Q86WR0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.05■■□□□ 1.28
CCDC25Q86WR0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC25Q86WR0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC25Q86WR0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC25Q86WR0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC25Q86WR0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC25Q86WR0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.04■■□□□ 1.28
CCDC25Q86WR0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC25Q86WR0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC25Q86WR0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.04■■□□□ 1.28
CCDC25Q86WR0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC25Q86WR0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC25Q86WR0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC25Q86WR0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC25Q86WR0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC25Q86WR0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC25Q86WR0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.03■■□□□ 1.28
CCDC25Q86WR0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC25Q86WR0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.03■■□□□ 1.28
CCDC25Q86WR0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC25Q86WR0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC25Q86WR0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.03■■□□□ 1.28
CCDC25Q86WR0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CCDC25Q86WR0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC25Q86WR0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
CCDC25Q86WR0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CCDC25Q86WR0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.02■■□□□ 1.28
CCDC25Q86WR0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.02■■□□□ 1.28
CCDC25Q86WR0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC25Q86WR0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.02■■□□□ 1.28
CCDC25Q86WR0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC25Q86WR0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC25Q86WR0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.02■■□□□ 1.28
CCDC25Q86WR0 AC011551.1-201ENST00000614101 683 ntBASIC23.02■■□□□ 1.28
CCDC25Q86WR0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
CCDC25Q86WR0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC25Q86WR0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CCDC25Q86WR0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC25Q86WR0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC25Q86WR0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC25Q86WR0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC25Q86WR0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.02■■□□□ 1.27
CCDC25Q86WR0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC25Q86WR0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC25Q86WR0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.01■■□□□ 1.27
CCDC25Q86WR0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.01■■□□□ 1.27
CCDC25Q86WR0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC25Q86WR0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
CCDC25Q86WR0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.01■■□□□ 1.27
CCDC25Q86WR0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC25Q86WR0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC25Q86WR0 AC079630.1-202ENST00000618127 1840 ntBASIC23.01■■□□□ 1.27
CCDC25Q86WR0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.01■■□□□ 1.27
CCDC25Q86WR0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
CCDC25Q86WR0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCDC25Q86WR0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCDC25Q86WR0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23■■□□□ 1.27
CCDC25Q86WR0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CCDC25Q86WR0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCDC25Q86WR0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CCDC25Q86WR0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23■■□□□ 1.27
CCDC25Q86WR0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23■■□□□ 1.27
CCDC25Q86WR0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23■■□□□ 1.27
CCDC25Q86WR0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23■■□□□ 1.27
CCDC25Q86WR0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.99■■□□□ 1.27
CCDC25Q86WR0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC25Q86WR0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC25Q86WR0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
CCDC25Q86WR0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
CCDC25Q86WR0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.99■■□□□ 1.27
CCDC25Q86WR0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
CCDC25Q86WR0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC25Q86WR0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.98■■□□□ 1.27
CCDC25Q86WR0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC25Q86WR0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC25Q86WR0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC25Q86WR0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC25Q86WR0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC22.98■■□□□ 1.27
CCDC25Q86WR0 AC242852.2-201ENST00000615738 1807 ntBASIC22.98■■□□□ 1.27
CCDC25Q86WR0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC25Q86WR0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.98■■□□□ 1.27
CCDC25Q86WR0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC25Q86WR0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC25Q86WR0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC25Q86WR0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC25Q86WR0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC25Q86WR0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC25Q86WR0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.97■■□□□ 1.27
CCDC25Q86WR0 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.97■■□□□ 1.27
CCDC25Q86WR0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC25Q86WR0 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC25Q86WR0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC25Q86WR0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.97■■□□□ 1.27
CCDC25Q86WR0 AC007375.3-201ENST00000600936 2314 ntBASIC22.97■■□□□ 1.27
CCDC25Q86WR0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.97■■□□□ 1.27
CCDC25Q86WR0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC25Q86WR0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms