Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ZC3HC1Q86WB0 EP400NL-214ENST00000641289 2402 ntBASIC22.3■■□□□ 1.16
ZC3HC1Q86WB0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ZC3HC1Q86WB0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
ZC3HC1Q86WB0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.3■■□□□ 1.16
ZC3HC1Q86WB0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
ZC3HC1Q86WB0 AC021242.3-201ENST00000607598 1377 ntBASIC22.29■■□□□ 1.16
ZC3HC1Q86WB0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
ZC3HC1Q86WB0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.29■■□□□ 1.16
ZC3HC1Q86WB0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ZC3HC1Q86WB0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ZC3HC1Q86WB0 GUSBP5-202ENST00000510805 1989 ntBASIC22.29■■□□□ 1.16
ZC3HC1Q86WB0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
ZC3HC1Q86WB0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.28■■□□□ 1.16
ZC3HC1Q86WB0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3HC1Q86WB0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3HC1Q86WB0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3HC1Q86WB0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
ZC3HC1Q86WB0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.28■■□□□ 1.16
ZC3HC1Q86WB0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3HC1Q86WB0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.28■■□□□ 1.16
ZC3HC1Q86WB0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.28■■□□□ 1.16
ZC3HC1Q86WB0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.28■■□□□ 1.16
ZC3HC1Q86WB0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
ZC3HC1Q86WB0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ZC3HC1Q86WB0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.27■■□□□ 1.16
ZC3HC1Q86WB0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ZC3HC1Q86WB0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ZC3HC1Q86WB0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ZC3HC1Q86WB0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.27■■□□□ 1.16
ZC3HC1Q86WB0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.27■■□□□ 1.16
ZC3HC1Q86WB0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
ZC3HC1Q86WB0 MIR6722-201ENST00000617286 78 ntBASIC22.27■■□□□ 1.16
ZC3HC1Q86WB0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
ZC3HC1Q86WB0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
ZC3HC1Q86WB0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.26■■□□□ 1.15
ZC3HC1Q86WB0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3HC1Q86WB0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3HC1Q86WB0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3HC1Q86WB0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3HC1Q86WB0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.26■■□□□ 1.15
ZC3HC1Q86WB0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.26■■□□□ 1.15
ZC3HC1Q86WB0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3HC1Q86WB0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3HC1Q86WB0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3HC1Q86WB0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3HC1Q86WB0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3HC1Q86WB0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.26■■□□□ 1.15
ZC3HC1Q86WB0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
ZC3HC1Q86WB0 AC144652.1-201ENST00000609974 1624 ntBASIC22.25■■□□□ 1.15
ZC3HC1Q86WB0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
ZC3HC1Q86WB0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3HC1Q86WB0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.25■■□□□ 1.15
ZC3HC1Q86WB0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.25■■□□□ 1.15
ZC3HC1Q86WB0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.25■■□□□ 1.15
ZC3HC1Q86WB0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.25■■□□□ 1.15
ZC3HC1Q86WB0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.25■■□□□ 1.15
ZC3HC1Q86WB0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.25■■□□□ 1.15
ZC3HC1Q86WB0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3HC1Q86WB0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3HC1Q86WB0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3HC1Q86WB0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3HC1Q86WB0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.24■■□□□ 1.15
ZC3HC1Q86WB0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3HC1Q86WB0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3HC1Q86WB0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3HC1Q86WB0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3HC1Q86WB0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3HC1Q86WB0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.23■■□□□ 1.15
ZC3HC1Q86WB0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.23■■□□□ 1.15
ZC3HC1Q86WB0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3HC1Q86WB0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
ZC3HC1Q86WB0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3HC1Q86WB0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3HC1Q86WB0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
ZC3HC1Q86WB0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
ZC3HC1Q86WB0 BX664725.1-201ENST00000438252 379 ntBASIC22.23■■□□□ 1.15
ZC3HC1Q86WB0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
ZC3HC1Q86WB0 AC005703.6-201ENST00000623265 1329 ntBASIC22.23■■□□□ 1.15
ZC3HC1Q86WB0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3HC1Q86WB0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
ZC3HC1Q86WB0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3HC1Q86WB0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3HC1Q86WB0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3HC1Q86WB0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.22■■□□□ 1.15
ZC3HC1Q86WB0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.22■■□□□ 1.15
ZC3HC1Q86WB0 ESRRAP2-201ENST00000418437 1549 ntBASIC22.22■■□□□ 1.15
ZC3HC1Q86WB0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
ZC3HC1Q86WB0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZC3HC1Q86WB0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZC3HC1Q86WB0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
ZC3HC1Q86WB0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.22■■□□□ 1.15
ZC3HC1Q86WB0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.22■■□□□ 1.15
ZC3HC1Q86WB0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZC3HC1Q86WB0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.22■■□□□ 1.15
ZC3HC1Q86WB0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
ZC3HC1Q86WB0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZC3HC1Q86WB0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZC3HC1Q86WB0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZC3HC1Q86WB0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms