Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 AC009086.3-201ENST00000623486 1008 ntBASIC21.45■■□□□ 1.02
RNF44Q7L0R7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF44Q7L0R7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF44Q7L0R7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF44Q7L0R7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
RNF44Q7L0R7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
RNF44Q7L0R7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.44■■□□□ 1.02
RNF44Q7L0R7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF44Q7L0R7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF44Q7L0R7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF44Q7L0R7 AC006455.2-201ENST00000429931 906 ntBASIC21.44■■□□□ 1.02
RNF44Q7L0R7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.44■■□□□ 1.02
RNF44Q7L0R7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.44■■□□□ 1.02
RNF44Q7L0R7 AL139246.5-201ENST00000606645 996 ntBASIC21.44■■□□□ 1.02
RNF44Q7L0R7 FP325331.1-202ENST00000623531 1380 ntBASIC21.44■■□□□ 1.02
RNF44Q7L0R7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF44Q7L0R7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF44Q7L0R7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF44Q7L0R7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF44Q7L0R7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF44Q7L0R7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RNF44Q7L0R7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF44Q7L0R7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF44Q7L0R7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
RNF44Q7L0R7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF44Q7L0R7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF44Q7L0R7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.43■■□□□ 1.02
RNF44Q7L0R7 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.43■■□□□ 1.02
RNF44Q7L0R7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.43■■□□□ 1.02
RNF44Q7L0R7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF44Q7L0R7 AC079630.1-202ENST00000618127 1840 ntBASIC21.43■■□□□ 1.02
RNF44Q7L0R7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.43■■□□□ 1.02
RNF44Q7L0R7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF44Q7L0R7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF44Q7L0R7 UNC93B3-201ENST00000308076 687 ntBASIC21.42■■□□□ 1.02
RNF44Q7L0R7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF44Q7L0R7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF44Q7L0R7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF44Q7L0R7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF44Q7L0R7 SYT6-210ENST00000641643 1587 ntBASIC21.42■■□□□ 1.02
RNF44Q7L0R7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF44Q7L0R7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
RNF44Q7L0R7 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF44Q7L0R7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RNF44Q7L0R7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF44Q7L0R7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF44Q7L0R7 SERBP1P1-201ENST00000396021 1160 ntBASIC21.41■■□□□ 1.02
RNF44Q7L0R7 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.41■■□□□ 1.02
RNF44Q7L0R7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF44Q7L0R7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.41■■□□□ 1.02
RNF44Q7L0R7 DUX4L4-201ENST00000566884 1269 ntBASIC21.41■■□□□ 1.02
RNF44Q7L0R7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF44Q7L0R7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF44Q7L0R7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF44Q7L0R7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
RNF44Q7L0R7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF44Q7L0R7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
RNF44Q7L0R7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
RNF44Q7L0R7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF44Q7L0R7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF44Q7L0R7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF44Q7L0R7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF44Q7L0R7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RNF44Q7L0R7 AL138724.1-201ENST00000606771 1088 ntBASIC21.4■■□□□ 1.02
RNF44Q7L0R7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.4■■□□□ 1.02
RNF44Q7L0R7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF44Q7L0R7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
RNF44Q7L0R7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.02
RNF44Q7L0R7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.39■■□□□ 1.01
RNF44Q7L0R7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF44Q7L0R7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.39■■□□□ 1.01
RNF44Q7L0R7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.39■■□□□ 1.01
RNF44Q7L0R7 AL136162.1-201ENST00000607711 1078 ntBASIC21.39■■□□□ 1.01
RNF44Q7L0R7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.39■■□□□ 1.01
RNF44Q7L0R7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.39■■□□□ 1.01
RNF44Q7L0R7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF44Q7L0R7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.39■■□□□ 1.01
RNF44Q7L0R7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF44Q7L0R7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF44Q7L0R7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF44Q7L0R7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF44Q7L0R7 LINC01529-204ENST00000636474 1715 ntBASIC21.38■■□□□ 1.01
RNF44Q7L0R7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.38■■□□□ 1.01
RNF44Q7L0R7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF44Q7L0R7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF44Q7L0R7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF44Q7L0R7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF44Q7L0R7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF44Q7L0R7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
RNF44Q7L0R7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF44Q7L0R7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.38■■□□□ 1.01
RNF44Q7L0R7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF44Q7L0R7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF44Q7L0R7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF44Q7L0R7 AC135279.3-201ENST00000610945 1311 ntBASIC21.37■■□□□ 1.01
RNF44Q7L0R7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF44Q7L0R7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF44Q7L0R7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.37■■□□□ 1.01
RNF44Q7L0R7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RNF44Q7L0R7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms