Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC34.76■■■■□ 3.16
CD109Q6YHK3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC34.76■■■■□ 3.16
CD109Q6YHK3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC34.76■■■■□ 3.16
CD109Q6YHK3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
CD109Q6YHK3 TSPY20P-201ENST00000450910 630 ntBASIC34.76■■■■□ 3.16
CD109Q6YHK3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC34.76■■■■□ 3.16
CD109Q6YHK3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC34.76■■■■□ 3.16
CD109Q6YHK3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC34.76■■■■□ 3.16
CD109Q6YHK3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
CD109Q6YHK3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
CD109Q6YHK3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
CD109Q6YHK3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC34.75■■■■□ 3.15
CD109Q6YHK3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC34.75■■■■□ 3.15
CD109Q6YHK3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC34.75■■■■□ 3.15
CD109Q6YHK3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
CD109Q6YHK3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
CD109Q6YHK3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC34.75■■■■□ 3.15
CD109Q6YHK3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC34.75■■■■□ 3.15
CD109Q6YHK3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
CD109Q6YHK3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
CD109Q6YHK3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
CD109Q6YHK3 AC004854.2-201ENST00000608450 1441 ntBASIC34.74■■■■□ 3.15
CD109Q6YHK3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC34.74■■■■□ 3.15
CD109Q6YHK3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC34.73■■■■□ 3.15
CD109Q6YHK3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC34.73■■■■□ 3.15
CD109Q6YHK3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
CD109Q6YHK3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC34.72■■■■□ 3.15
CD109Q6YHK3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
CD109Q6YHK3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
CD109Q6YHK3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
CD109Q6YHK3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC34.72■■■■□ 3.15
CD109Q6YHK3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
CD109Q6YHK3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC34.72■■■■□ 3.15
CD109Q6YHK3 AC142086.2-201ENST00000569753 217 ntBASIC34.72■■■■□ 3.15
CD109Q6YHK3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC34.72■■■■□ 3.15
CD109Q6YHK3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC34.72■■■■□ 3.15
CD109Q6YHK3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC34.72■■■■□ 3.15
CD109Q6YHK3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC34.72■■■■□ 3.15
CD109Q6YHK3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC34.71■■■■□ 3.15
CD109Q6YHK3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
CD109Q6YHK3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC34.71■■■■□ 3.15
CD109Q6YHK3 SLC6A10P-202ENST00000431994 2058 ntBASIC34.71■■■■□ 3.15
CD109Q6YHK3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
CD109Q6YHK3 COX20-201ENST00000366528 568 ntTSL 2 BASIC34.71■■■■□ 3.15
CD109Q6YHK3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC34.71■■■■□ 3.15
CD109Q6YHK3 APTR-205ENST00000447009 902 ntTSL 2 BASIC34.71■■■■□ 3.15
CD109Q6YHK3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
CD109Q6YHK3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC34.7■■■■□ 3.15
CD109Q6YHK3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC34.7■■■■□ 3.15
CD109Q6YHK3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC34.7■■■■□ 3.15
CD109Q6YHK3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC34.7■■■■□ 3.15
CD109Q6YHK3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC34.7■■■■□ 3.15
CD109Q6YHK3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC34.69■■■■□ 3.14
CD109Q6YHK3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC34.69■■■■□ 3.14
CD109Q6YHK3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
CD109Q6YHK3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC34.69■■■■□ 3.14
CD109Q6YHK3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC34.69■■■■□ 3.14
CD109Q6YHK3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC34.69■■■■□ 3.14
CD109Q6YHK3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
CD109Q6YHK3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
CD109Q6YHK3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
CD109Q6YHK3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC34.68■■■■□ 3.14
CD109Q6YHK3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC34.68■■■■□ 3.14
CD109Q6YHK3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC34.68■■■■□ 3.14
CD109Q6YHK3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
CD109Q6YHK3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC34.67■■■■□ 3.14
CD109Q6YHK3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
CD109Q6YHK3 GPX1P1-201ENST00000388829 606 ntBASIC34.67■■■■□ 3.14
CD109Q6YHK3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
CD109Q6YHK3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC34.66■■■■□ 3.14
CD109Q6YHK3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC34.66■■■■□ 3.14
CD109Q6YHK3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
CD109Q6YHK3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC34.66■■■■□ 3.14
CD109Q6YHK3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC34.66■■■■□ 3.14
CD109Q6YHK3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC34.66■■■■□ 3.14
CD109Q6YHK3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC34.66■■■■□ 3.14
CD109Q6YHK3 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CD109Q6YHK3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC34.66■■■■□ 3.14
CD109Q6YHK3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC34.65■■■■□ 3.14
CD109Q6YHK3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC34.65■■■■□ 3.14
CD109Q6YHK3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC34.65■■■■□ 3.14
CD109Q6YHK3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
CD109Q6YHK3 AL161729.1-201ENST00000604104 1402 ntBASIC34.65■■■■□ 3.14
CD109Q6YHK3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC34.64■■■■□ 3.14
CD109Q6YHK3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
CD109Q6YHK3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC34.64■■■■□ 3.14
CD109Q6YHK3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
CD109Q6YHK3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC34.64■■■■□ 3.14
CD109Q6YHK3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC34.64■■■■□ 3.14
CD109Q6YHK3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC34.64■■■■□ 3.14
CD109Q6YHK3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
CD109Q6YHK3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
CD109Q6YHK3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
CD109Q6YHK3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC34.64■■■■□ 3.14
CD109Q6YHK3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
CD109Q6YHK3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
CD109Q6YHK3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
CD109Q6YHK3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC34.63■■■■□ 3.13
CD109Q6YHK3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC34.63■■■■□ 3.13
CD109Q6YHK3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms