Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SLC27A1Q6PCB7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SLC27A1Q6PCB7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.39■■□□□ 1.5
SLC27A1Q6PCB7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SLC27A1Q6PCB7 AC099791.1-201ENST00000416440 715 ntBASIC24.39■■□□□ 1.49
SLC27A1Q6PCB7 BX842568.3-201ENST00000418104 571 ntBASIC24.39■■□□□ 1.49
SLC27A1Q6PCB7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SLC27A1Q6PCB7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.39■■□□□ 1.49
SLC27A1Q6PCB7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.39■■□□□ 1.49
SLC27A1Q6PCB7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.39■■□□□ 1.49
SLC27A1Q6PCB7 AL499627.2-201ENST00000606283 725 ntBASIC24.39■■□□□ 1.49
SLC27A1Q6PCB7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SLC27A1Q6PCB7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SLC27A1Q6PCB7 LINC01529-204ENST00000636474 1715 ntBASIC24.38■■□□□ 1.49
SLC27A1Q6PCB7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.38■■□□□ 1.49
SLC27A1Q6PCB7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SLC27A1Q6PCB7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.38■■□□□ 1.49
SLC27A1Q6PCB7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.38■■□□□ 1.49
SLC27A1Q6PCB7 AC233992.3-201ENST00000607491 485 ntBASIC24.38■■□□□ 1.49
SLC27A1Q6PCB7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SLC27A1Q6PCB7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.38■■□□□ 1.49
SLC27A1Q6PCB7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC27A1Q6PCB7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.37■■□□□ 1.49
SLC27A1Q6PCB7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.37■■□□□ 1.49
SLC27A1Q6PCB7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SLC27A1Q6PCB7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SLC27A1Q6PCB7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
SLC27A1Q6PCB7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC27A1Q6PCB7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC27A1Q6PCB7 AC133637.1-201ENST00000624115 1537 ntBASIC24.36■■□□□ 1.49
SLC27A1Q6PCB7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLC27A1Q6PCB7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLC27A1Q6PCB7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLC27A1Q6PCB7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.36■■□□□ 1.49
SLC27A1Q6PCB7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SLC27A1Q6PCB7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.36■■□□□ 1.49
SLC27A1Q6PCB7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.36■■□□□ 1.49
SLC27A1Q6PCB7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SLC27A1Q6PCB7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLC27A1Q6PCB7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SLC27A1Q6PCB7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.36■■□□□ 1.49
SLC27A1Q6PCB7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLC27A1Q6PCB7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.36■■□□□ 1.49
SLC27A1Q6PCB7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLC27A1Q6PCB7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SLC27A1Q6PCB7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC24.35■■□□□ 1.49
SLC27A1Q6PCB7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLC27A1Q6PCB7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.35■■□□□ 1.49
SLC27A1Q6PCB7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
SLC27A1Q6PCB7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC27A1Q6PCB7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC27A1Q6PCB7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SLC27A1Q6PCB7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC27A1Q6PCB7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC27A1Q6PCB7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.34■■□□□ 1.49
SLC27A1Q6PCB7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.34■■□□□ 1.49
SLC27A1Q6PCB7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.34■■□□□ 1.49
SLC27A1Q6PCB7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SLC27A1Q6PCB7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC27A1Q6PCB7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC27A1Q6PCB7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC27A1Q6PCB7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
SLC27A1Q6PCB7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SLC27A1Q6PCB7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SLC27A1Q6PCB7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC27A1Q6PCB7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.33■■□□□ 1.49
SLC27A1Q6PCB7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.33■■□□□ 1.49
SLC27A1Q6PCB7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.33■■□□□ 1.49
SLC27A1Q6PCB7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.33■■□□□ 1.49
SLC27A1Q6PCB7 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.33■■□□□ 1.49
SLC27A1Q6PCB7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SLC27A1Q6PCB7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
SLC27A1Q6PCB7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.33■■□□□ 1.49
SLC27A1Q6PCB7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.32■■□□□ 1.48
SLC27A1Q6PCB7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.32■■□□□ 1.48
SLC27A1Q6PCB7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.32■■□□□ 1.48
SLC27A1Q6PCB7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC27A1Q6PCB7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SLC27A1Q6PCB7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC27A1Q6PCB7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SLC27A1Q6PCB7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC27A1Q6PCB7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC27A1Q6PCB7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SLC27A1Q6PCB7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.31■■□□□ 1.48
SLC27A1Q6PCB7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLC27A1Q6PCB7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
SLC27A1Q6PCB7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLC27A1Q6PCB7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLC27A1Q6PCB7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.31■■□□□ 1.48
SLC27A1Q6PCB7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.31■■□□□ 1.48
SLC27A1Q6PCB7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.31■■□□□ 1.48
SLC27A1Q6PCB7 SLC47A1P1-202ENST00000449666 945 ntBASIC24.31■■□□□ 1.48
SLC27A1Q6PCB7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.31■■□□□ 1.48
SLC27A1Q6PCB7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
SLC27A1Q6PCB7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLC27A1Q6PCB7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SLC27A1Q6PCB7 AC079630.1-202ENST00000618127 1840 ntBASIC24.31■■□□□ 1.48
SLC27A1Q6PCB7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SLC27A1Q6PCB7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLC27A1Q6PCB7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms