Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
GFI1BQ5VTD9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GFI1BQ5VTD9 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GFI1BQ5VTD9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GFI1BQ5VTD9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GFI1BQ5VTD9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GFI1BQ5VTD9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GFI1BQ5VTD9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GFI1BQ5VTD9 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GFI1BQ5VTD9 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GFI1BQ5VTD9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GFI1BQ5VTD9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
GFI1BQ5VTD9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GFI1BQ5VTD9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
GFI1BQ5VTD9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GFI1BQ5VTD9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GFI1BQ5VTD9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
GFI1BQ5VTD9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.41■□□□□ 0.38
GFI1BQ5VTD9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFI1BQ5VTD9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFI1BQ5VTD9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
GFI1BQ5VTD9 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.4■□□□□ 0.38
GFI1BQ5VTD9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFI1BQ5VTD9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
GFI1BQ5VTD9 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GFI1BQ5VTD9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFI1BQ5VTD9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFI1BQ5VTD9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFI1BQ5VTD9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.4■□□□□ 0.38
GFI1BQ5VTD9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
GFI1BQ5VTD9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFI1BQ5VTD9 AC009831.1-201ENST00000580420 1582 ntBASIC17.4■□□□□ 0.38
GFI1BQ5VTD9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GFI1BQ5VTD9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
GFI1BQ5VTD9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
GFI1BQ5VTD9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
GFI1BQ5VTD9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
GFI1BQ5VTD9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
GFI1BQ5VTD9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
GFI1BQ5VTD9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFI1BQ5VTD9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFI1BQ5VTD9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFI1BQ5VTD9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFI1BQ5VTD9 AC007952.6-201ENST00000573168 2673 ntBASIC17.39■□□□□ 0.37
GFI1BQ5VTD9 AC003957.1-201ENST00000625108 2673 ntBASIC17.39■□□□□ 0.37
GFI1BQ5VTD9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFI1BQ5VTD9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFI1BQ5VTD9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFI1BQ5VTD9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.39■□□□□ 0.37
GFI1BQ5VTD9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFI1BQ5VTD9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.38■□□□□ 0.37
GFI1BQ5VTD9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFI1BQ5VTD9 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFI1BQ5VTD9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.38■□□□□ 0.37
GFI1BQ5VTD9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GFI1BQ5VTD9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFI1BQ5VTD9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
GFI1BQ5VTD9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.38■□□□□ 0.37
GFI1BQ5VTD9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFI1BQ5VTD9 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GFI1BQ5VTD9 AC133552.2-201ENST00000619106 1032 ntBASIC17.38■□□□□ 0.37
GFI1BQ5VTD9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.38■□□□□ 0.37
GFI1BQ5VTD9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFI1BQ5VTD9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.38■□□□□ 0.37
GFI1BQ5VTD9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GFI1BQ5VTD9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GFI1BQ5VTD9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GFI1BQ5VTD9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.37■□□□□ 0.37
GFI1BQ5VTD9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GFI1BQ5VTD9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GFI1BQ5VTD9 KRT18P10-201ENST00000388836 1287 ntBASIC17.37■□□□□ 0.37
GFI1BQ5VTD9 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GFI1BQ5VTD9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GFI1BQ5VTD9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GFI1BQ5VTD9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms