Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.08■□□□□ 0.65
ARFGEF3Q5TH69 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
ARFGEF3Q5TH69 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ARFGEF3Q5TH69 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ARFGEF3Q5TH69 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ARFGEF3Q5TH69 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.08■□□□□ 0.64
ARFGEF3Q5TH69 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ARFGEF3Q5TH69 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ARFGEF3Q5TH69 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.08■□□□□ 0.64
ARFGEF3Q5TH69 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ARFGEF3Q5TH69 AC141586.4-201ENST00000624558 1573 ntBASIC19.08■□□□□ 0.64
ARFGEF3Q5TH69 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ARFGEF3Q5TH69 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ARFGEF3Q5TH69 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
ARFGEF3Q5TH69 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ARFGEF3Q5TH69 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ARFGEF3Q5TH69 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ARFGEF3Q5TH69 ABCB10P4-201ENST00000566803 2184 ntBASIC19.07■□□□□ 0.64
ARFGEF3Q5TH69 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ARFGEF3Q5TH69 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ARFGEF3Q5TH69 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ARFGEF3Q5TH69 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.07■□□□□ 0.64
ARFGEF3Q5TH69 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
ARFGEF3Q5TH69 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARFGEF3Q5TH69 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ARFGEF3Q5TH69 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARFGEF3Q5TH69 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.06■□□□□ 0.64
ARFGEF3Q5TH69 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.06■□□□□ 0.64
ARFGEF3Q5TH69 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
ARFGEF3Q5TH69 AC233992.3-201ENST00000607491 485 ntBASIC19.06■□□□□ 0.64
ARFGEF3Q5TH69 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
ARFGEF3Q5TH69 FP325331.1-202ENST00000623531 1380 ntBASIC19.06■□□□□ 0.64
ARFGEF3Q5TH69 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
ARFGEF3Q5TH69 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ARFGEF3Q5TH69 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARFGEF3Q5TH69 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.06■□□□□ 0.64
ARFGEF3Q5TH69 AC087623.3-201ENST00000607047 1098 ntBASIC19.06■□□□□ 0.64
ARFGEF3Q5TH69 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
ARFGEF3Q5TH69 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ARFGEF3Q5TH69 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.05■□□□□ 0.64
ARFGEF3Q5TH69 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ARFGEF3Q5TH69 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ARFGEF3Q5TH69 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
ARFGEF3Q5TH69 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ARFGEF3Q5TH69 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.05■□□□□ 0.64
ARFGEF3Q5TH69 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.05■□□□□ 0.64
ARFGEF3Q5TH69 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.05■□□□□ 0.64
ARFGEF3Q5TH69 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.05■□□□□ 0.64
ARFGEF3Q5TH69 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.05■□□□□ 0.64
ARFGEF3Q5TH69 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.05■□□□□ 0.64
ARFGEF3Q5TH69 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ARFGEF3Q5TH69 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ARFGEF3Q5TH69 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ARFGEF3Q5TH69 AC144652.1-201ENST00000609974 1624 ntBASIC19.04■□□□□ 0.64
ARFGEF3Q5TH69 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ARFGEF3Q5TH69 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ARFGEF3Q5TH69 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ARFGEF3Q5TH69 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ARFGEF3Q5TH69 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ARFGEF3Q5TH69 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ARFGEF3Q5TH69 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ARFGEF3Q5TH69 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ARFGEF3Q5TH69 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ARFGEF3Q5TH69 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.03■□□□□ 0.64
ARFGEF3Q5TH69 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
ARFGEF3Q5TH69 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.03■□□□□ 0.64
ARFGEF3Q5TH69 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ARFGEF3Q5TH69 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ARFGEF3Q5TH69 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARFGEF3Q5TH69 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARFGEF3Q5TH69 AC079630.1-202ENST00000618127 1840 ntBASIC19.02■□□□□ 0.64
ARFGEF3Q5TH69 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARFGEF3Q5TH69 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARFGEF3Q5TH69 AC034268.1-201ENST00000441047 882 ntBASIC19.02■□□□□ 0.64
ARFGEF3Q5TH69 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.02■□□□□ 0.64
ARFGEF3Q5TH69 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.02■□□□□ 0.64
ARFGEF3Q5TH69 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARFGEF3Q5TH69 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARFGEF3Q5TH69 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
ARFGEF3Q5TH69 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.02■□□□□ 0.63
ARFGEF3Q5TH69 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ARFGEF3Q5TH69 pRNA.6-201ENST00000610482 90 ntBASIC19.02■□□□□ 0.63
ARFGEF3Q5TH69 pRNA.5-201ENST00000612139 90 ntBASIC19.02■□□□□ 0.63
ARFGEF3Q5TH69 pRNA.11-201ENST00000618423 90 ntBASIC19.02■□□□□ 0.63
ARFGEF3Q5TH69 pRNA.13-201ENST00000619112 90 ntBASIC19.02■□□□□ 0.63
ARFGEF3Q5TH69 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ARFGEF3Q5TH69 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
ARFGEF3Q5TH69 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
ARFGEF3Q5TH69 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.01■□□□□ 0.63
ARFGEF3Q5TH69 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARFGEF3Q5TH69 IRS3P-201ENST00000223076 1006 ntBASIC19.01■□□□□ 0.63
ARFGEF3Q5TH69 AC097381.1-201ENST00000429019 1296 ntBASIC19.01■□□□□ 0.63
ARFGEF3Q5TH69 AC010525.1-201ENST00000585559 441 ntBASIC19.01■□□□□ 0.63
ARFGEF3Q5TH69 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARFGEF3Q5TH69 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ARFGEF3Q5TH69 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ARFGEF3Q5TH69 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.01■□□□□ 0.63
ARFGEF3Q5TH69 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
ARFGEF3Q5TH69 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
ARFGEF3Q5TH69 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms