Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
KRTCAP3Q53RY4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRTCAP3Q53RY4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.14■□□□□ 0.81
KRTCAP3Q53RY4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRTCAP3Q53RY4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.14■□□□□ 0.81
KRTCAP3Q53RY4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRTCAP3Q53RY4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRTCAP3Q53RY4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.14■□□□□ 0.81
KRTCAP3Q53RY4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.14■□□□□ 0.81
KRTCAP3Q53RY4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KRTCAP3Q53RY4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRTCAP3Q53RY4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.14■□□□□ 0.81
KRTCAP3Q53RY4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
KRTCAP3Q53RY4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
KRTCAP3Q53RY4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.13■□□□□ 0.81
KRTCAP3Q53RY4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.13■□□□□ 0.81
KRTCAP3Q53RY4 OR2I1P-207ENST00000453522 948 ntBASIC20.13■□□□□ 0.81
KRTCAP3Q53RY4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.13■□□□□ 0.81
KRTCAP3Q53RY4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.13■□□□□ 0.81
KRTCAP3Q53RY4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.13■□□□□ 0.81
KRTCAP3Q53RY4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KRTCAP3Q53RY4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
KRTCAP3Q53RY4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.13■□□□□ 0.81
KRTCAP3Q53RY4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRTCAP3Q53RY4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.12■□□□□ 0.81
KRTCAP3Q53RY4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.12■□□□□ 0.81
KRTCAP3Q53RY4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRTCAP3Q53RY4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KRTCAP3Q53RY4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KRTCAP3Q53RY4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KRTCAP3Q53RY4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.12■□□□□ 0.81
KRTCAP3Q53RY4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.12■□□□□ 0.81
KRTCAP3Q53RY4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.12■□□□□ 0.81
KRTCAP3Q53RY4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
KRTCAP3Q53RY4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRTCAP3Q53RY4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRTCAP3Q53RY4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRTCAP3Q53RY4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
KRTCAP3Q53RY4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRTCAP3Q53RY4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KRTCAP3Q53RY4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.11■□□□□ 0.81
KRTCAP3Q53RY4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
KRTCAP3Q53RY4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
KRTCAP3Q53RY4 AC012414.1-201ENST00000556676 535 ntBASIC20.11■□□□□ 0.81
KRTCAP3Q53RY4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KRTCAP3Q53RY4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
KRTCAP3Q53RY4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KRTCAP3Q53RY4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.11■□□□□ 0.81
KRTCAP3Q53RY4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
KRTCAP3Q53RY4 LINC01529-204ENST00000636474 1715 ntBASIC20.1■□□□□ 0.81
KRTCAP3Q53RY4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.1■□□□□ 0.81
KRTCAP3Q53RY4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KRTCAP3Q53RY4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
KRTCAP3Q53RY4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRTCAP3Q53RY4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRTCAP3Q53RY4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KRTCAP3Q53RY4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KRTCAP3Q53RY4 AP005435.1-201ENST00000529293 1178 ntBASIC20.1■□□□□ 0.81
KRTCAP3Q53RY4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.1■□□□□ 0.81
KRTCAP3Q53RY4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
KRTCAP3Q53RY4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRTCAP3Q53RY4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRTCAP3Q53RY4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.1■□□□□ 0.81
KRTCAP3Q53RY4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRTCAP3Q53RY4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRTCAP3Q53RY4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KRTCAP3Q53RY4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRTCAP3Q53RY4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
KRTCAP3Q53RY4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KRTCAP3Q53RY4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KRTCAP3Q53RY4 AC022517.1-201ENST00000592429 346 ntBASIC20.09■□□□□ 0.81
KRTCAP3Q53RY4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRTCAP3Q53RY4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.09■□□□□ 0.81
KRTCAP3Q53RY4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRTCAP3Q53RY4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KRTCAP3Q53RY4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRTCAP3Q53RY4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KRTCAP3Q53RY4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
KRTCAP3Q53RY4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KRTCAP3Q53RY4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KRTCAP3Q53RY4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.08■□□□□ 0.81
KRTCAP3Q53RY4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
KRTCAP3Q53RY4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KRTCAP3Q53RY4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.08■□□□□ 0.81
KRTCAP3Q53RY4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
KRTCAP3Q53RY4 AC144652.1-201ENST00000609974 1624 ntBASIC20.08■□□□□ 0.8
KRTCAP3Q53RY4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
KRTCAP3Q53RY4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.08■□□□□ 0.8
KRTCAP3Q53RY4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
KRTCAP3Q53RY4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
KRTCAP3Q53RY4 AC142381.3-201ENST00000568208 1670 ntBASIC20.07■□□□□ 0.8
KRTCAP3Q53RY4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.07■□□□□ 0.8
KRTCAP3Q53RY4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRTCAP3Q53RY4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.07■□□□□ 0.8
KRTCAP3Q53RY4 KRT18P5-201ENST00000436075 1291 ntBASIC20.07■□□□□ 0.8
KRTCAP3Q53RY4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.07■□□□□ 0.8
KRTCAP3Q53RY4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.07■□□□□ 0.8
KRTCAP3Q53RY4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
KRTCAP3Q53RY4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRTCAP3Q53RY4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms