Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.7■□□□□ 0.74
PCGF3Q3KNV8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.7■□□□□ 0.74
PCGF3Q3KNV8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCGF3Q3KNV8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCGF3Q3KNV8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCGF3Q3KNV8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PCGF3Q3KNV8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCGF3Q3KNV8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PCGF3Q3KNV8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.69■□□□□ 0.74
PCGF3Q3KNV8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.69■□□□□ 0.74
PCGF3Q3KNV8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.69■□□□□ 0.74
PCGF3Q3KNV8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCGF3Q3KNV8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.69■□□□□ 0.74
PCGF3Q3KNV8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PCGF3Q3KNV8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.69■□□□□ 0.74
PCGF3Q3KNV8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.69■□□□□ 0.74
PCGF3Q3KNV8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.69■□□□□ 0.74
PCGF3Q3KNV8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PCGF3Q3KNV8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PCGF3Q3KNV8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCGF3Q3KNV8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCGF3Q3KNV8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCGF3Q3KNV8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCGF3Q3KNV8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCGF3Q3KNV8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCGF3Q3KNV8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCGF3Q3KNV8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PCGF3Q3KNV8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.68■□□□□ 0.74
PCGF3Q3KNV8 AC010997.5-201ENST00000609182 354 ntBASIC19.68■□□□□ 0.74
PCGF3Q3KNV8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCGF3Q3KNV8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCGF3Q3KNV8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCGF3Q3KNV8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PCGF3Q3KNV8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PCGF3Q3KNV8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCGF3Q3KNV8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCGF3Q3KNV8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PCGF3Q3KNV8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCGF3Q3KNV8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
PCGF3Q3KNV8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PCGF3Q3KNV8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PCGF3Q3KNV8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCGF3Q3KNV8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCGF3Q3KNV8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCGF3Q3KNV8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCGF3Q3KNV8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCGF3Q3KNV8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 AC131212.1-201ENST00000613771 668 ntBASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.66■□□□□ 0.74
PCGF3Q3KNV8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCGF3Q3KNV8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCGF3Q3KNV8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCGF3Q3KNV8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCGF3Q3KNV8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCGF3Q3KNV8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.65■□□□□ 0.74
PCGF3Q3KNV8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCGF3Q3KNV8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.65■□□□□ 0.74
PCGF3Q3KNV8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.65■□□□□ 0.74
PCGF3Q3KNV8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PCGF3Q3KNV8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCGF3Q3KNV8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCGF3Q3KNV8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCGF3Q3KNV8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCGF3Q3KNV8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCGF3Q3KNV8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PCGF3Q3KNV8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PCGF3Q3KNV8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCGF3Q3KNV8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCGF3Q3KNV8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCGF3Q3KNV8 SNX5-217ENST00000606557 1087 ntBASIC19.64■□□□□ 0.73
PCGF3Q3KNV8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.64■□□□□ 0.73
PCGF3Q3KNV8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCGF3Q3KNV8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.64■□□□□ 0.73
PCGF3Q3KNV8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCGF3Q3KNV8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PCGF3Q3KNV8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PCGF3Q3KNV8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.64■□□□□ 0.73
PCGF3Q3KNV8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms