Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SHROOM1Q2M3G4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.81
SHROOM1Q2M3G4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
SHROOM1Q2M3G4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SHROOM1Q2M3G4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.39■■□□□ 1.81
SHROOM1Q2M3G4 TSPY26P-201ENST00000476365 1326 ntBASIC26.39■■□□□ 1.81
SHROOM1Q2M3G4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.39■■□□□ 1.81
SHROOM1Q2M3G4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SHROOM1Q2M3G4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SHROOM1Q2M3G4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SHROOM1Q2M3G4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
SHROOM1Q2M3G4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC26.38■■□□□ 1.81
SHROOM1Q2M3G4 AC126544.1-201ENST00000580842 1059 ntBASIC26.38■■□□□ 1.81
SHROOM1Q2M3G4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.38■■□□□ 1.81
SHROOM1Q2M3G4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SHROOM1Q2M3G4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC26.38■■□□□ 1.81
SHROOM1Q2M3G4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SHROOM1Q2M3G4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SHROOM1Q2M3G4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SHROOM1Q2M3G4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SHROOM1Q2M3G4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
SHROOM1Q2M3G4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC26.37■■□□□ 1.81
SHROOM1Q2M3G4 AC133637.1-201ENST00000624115 1537 ntBASIC26.37■■□□□ 1.81
SHROOM1Q2M3G4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
SHROOM1Q2M3G4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SHROOM1Q2M3G4 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.36■■□□□ 1.81
SHROOM1Q2M3G4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26.36■■□□□ 1.81
SHROOM1Q2M3G4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SHROOM1Q2M3G4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC26.36■■□□□ 1.81
SHROOM1Q2M3G4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
SHROOM1Q2M3G4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SHROOM1Q2M3G4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
SHROOM1Q2M3G4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SHROOM1Q2M3G4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SHROOM1Q2M3G4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.35■■□□□ 1.81
SHROOM1Q2M3G4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
SHROOM1Q2M3G4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC26.35■■□□□ 1.81
SHROOM1Q2M3G4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC26.35■■□□□ 1.81
SHROOM1Q2M3G4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SHROOM1Q2M3G4 AC004812.2-201ENST00000611079 2094 ntBASIC26.35■■□□□ 1.81
SHROOM1Q2M3G4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SHROOM1Q2M3G4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
SHROOM1Q2M3G4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
SHROOM1Q2M3G4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SHROOM1Q2M3G4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SHROOM1Q2M3G4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC26.34■■□□□ 1.81
SHROOM1Q2M3G4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC26.34■■□□□ 1.81
SHROOM1Q2M3G4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SHROOM1Q2M3G4 LINC01124-201ENST00000409786 2117 ntBASIC26.33■■□□□ 1.81
SHROOM1Q2M3G4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC26.33■■□□□ 1.81
SHROOM1Q2M3G4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SHROOM1Q2M3G4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC26.33■■□□□ 1.81
SHROOM1Q2M3G4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC26.33■■□□□ 1.81
SHROOM1Q2M3G4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC26.33■■□□□ 1.81
SHROOM1Q2M3G4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.33■■□□□ 1.81
SHROOM1Q2M3G4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SHROOM1Q2M3G4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
SHROOM1Q2M3G4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SHROOM1Q2M3G4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SHROOM1Q2M3G4 AL499627.2-201ENST00000606283 725 ntBASIC26.32■■□□□ 1.8
SHROOM1Q2M3G4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC26.32■■□□□ 1.8
SHROOM1Q2M3G4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC26.32■■□□□ 1.8
SHROOM1Q2M3G4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
SHROOM1Q2M3G4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
SHROOM1Q2M3G4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SHROOM1Q2M3G4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SHROOM1Q2M3G4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC26.31■■□□□ 1.8
SHROOM1Q2M3G4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC26.31■■□□□ 1.8
SHROOM1Q2M3G4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SHROOM1Q2M3G4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SHROOM1Q2M3G4 MIR6084-201ENST00000622012 110 ntBASIC26.31■■□□□ 1.8
SHROOM1Q2M3G4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SHROOM1Q2M3G4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SHROOM1Q2M3G4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
SHROOM1Q2M3G4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
SHROOM1Q2M3G4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.3■■□□□ 1.8
SHROOM1Q2M3G4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.3■■□□□ 1.8
SHROOM1Q2M3G4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.3■■□□□ 1.8
SHROOM1Q2M3G4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC26.3■■□□□ 1.8
SHROOM1Q2M3G4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC26.3■■□□□ 1.8
SHROOM1Q2M3G4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC26.3■■□□□ 1.8
SHROOM1Q2M3G4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SHROOM1Q2M3G4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC26.3■■□□□ 1.8
SHROOM1Q2M3G4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SHROOM1Q2M3G4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC26.3■■□□□ 1.8
SHROOM1Q2M3G4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SHROOM1Q2M3G4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26.29■■□□□ 1.8
SHROOM1Q2M3G4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SHROOM1Q2M3G4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC26.29■■□□□ 1.8
SHROOM1Q2M3G4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC26.29■■□□□ 1.8
SHROOM1Q2M3G4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC26.29■■□□□ 1.8
SHROOM1Q2M3G4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
SHROOM1Q2M3G4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.29■■□□□ 1.8
SHROOM1Q2M3G4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.28■■□□□ 1.8
SHROOM1Q2M3G4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SHROOM1Q2M3G4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SHROOM1Q2M3G4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SHROOM1Q2M3G4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.28■■□□□ 1.8
SHROOM1Q2M3G4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
SHROOM1Q2M3G4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms