Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
SPHKAPQ2M3C7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
SPHKAPQ2M3C7 EED-207ENST00000528180 1745 ntTSL 5 BASIC32.66■■■□□ 2.82
SPHKAPQ2M3C7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC32.66■■■□□ 2.82
SPHKAPQ2M3C7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
SPHKAPQ2M3C7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC32.66■■■□□ 2.82
SPHKAPQ2M3C7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
SPHKAPQ2M3C7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
SPHKAPQ2M3C7 IKBKGP1-201ENST00000612193 1073 ntBASIC32.65■■■□□ 2.82
SPHKAPQ2M3C7 AL358852.1-201ENST00000623174 1268 ntBASIC32.65■■■□□ 2.82
SPHKAPQ2M3C7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
SPHKAPQ2M3C7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
SPHKAPQ2M3C7 AC135731.1-201ENST00000569415 2548 ntBASIC32.65■■■□□ 2.82
SPHKAPQ2M3C7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC32.65■■■□□ 2.82
SPHKAPQ2M3C7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
SPHKAPQ2M3C7 AC144652.1-201ENST00000609974 1624 ntBASIC32.64■■■□□ 2.82
SPHKAPQ2M3C7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC32.64■■■□□ 2.82
SPHKAPQ2M3C7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
SPHKAPQ2M3C7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
SPHKAPQ2M3C7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
SPHKAPQ2M3C7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC32.64■■■□□ 2.82
SPHKAPQ2M3C7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC32.64■■■□□ 2.82
SPHKAPQ2M3C7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
SPHKAPQ2M3C7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC32.64■■■□□ 2.82
SPHKAPQ2M3C7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC32.64■■■□□ 2.82
SPHKAPQ2M3C7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
SPHKAPQ2M3C7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC32.63■■■□□ 2.81
SPHKAPQ2M3C7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC32.63■■■□□ 2.81
SPHKAPQ2M3C7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
SPHKAPQ2M3C7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
SPHKAPQ2M3C7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC32.63■■■□□ 2.81
SPHKAPQ2M3C7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC32.63■■■□□ 2.81
SPHKAPQ2M3C7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
SPHKAPQ2M3C7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
SPHKAPQ2M3C7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC32.63■■■□□ 2.81
SPHKAPQ2M3C7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC32.63■■■□□ 2.81
SPHKAPQ2M3C7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
SPHKAPQ2M3C7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
SPHKAPQ2M3C7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
SPHKAPQ2M3C7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
SPHKAPQ2M3C7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC32.62■■■□□ 2.81
SPHKAPQ2M3C7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
SPHKAPQ2M3C7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC32.62■■■□□ 2.81
SPHKAPQ2M3C7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC32.62■■■□□ 2.81
SPHKAPQ2M3C7 MIR6084-201ENST00000622012 110 ntBASIC32.62■■■□□ 2.81
SPHKAPQ2M3C7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
SPHKAPQ2M3C7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC32.62■■■□□ 2.81
SPHKAPQ2M3C7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC32.62■■■□□ 2.81
SPHKAPQ2M3C7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
SPHKAPQ2M3C7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
SPHKAPQ2M3C7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
SPHKAPQ2M3C7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC32.61■■■□□ 2.81
SPHKAPQ2M3C7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC32.61■■■□□ 2.81
SPHKAPQ2M3C7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC32.61■■■□□ 2.81
SPHKAPQ2M3C7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC32.61■■■□□ 2.81
SPHKAPQ2M3C7 AL354811.1-201ENST00000610286 706 ntBASIC32.61■■■□□ 2.81
SPHKAPQ2M3C7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC32.61■■■□□ 2.81
SPHKAPQ2M3C7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC32.61■■■□□ 2.81
SPHKAPQ2M3C7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
SPHKAPQ2M3C7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC32.6■■■□□ 2.81
SPHKAPQ2M3C7 DUX4L4-201ENST00000566884 1269 ntBASIC32.6■■■□□ 2.81
SPHKAPQ2M3C7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC32.6■■■□□ 2.81
SPHKAPQ2M3C7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
SPHKAPQ2M3C7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
SPHKAPQ2M3C7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
SPHKAPQ2M3C7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
SPHKAPQ2M3C7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC32.6■■■□□ 2.81
SPHKAPQ2M3C7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC32.59■■■□□ 2.81
SPHKAPQ2M3C7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC32.59■■■□□ 2.81
SPHKAPQ2M3C7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
SPHKAPQ2M3C7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC32.59■■■□□ 2.81
SPHKAPQ2M3C7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC32.59■■■□□ 2.81
SPHKAPQ2M3C7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
SPHKAPQ2M3C7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
SPHKAPQ2M3C7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
SPHKAPQ2M3C7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
SPHKAPQ2M3C7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
SPHKAPQ2M3C7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC32.59■■■□□ 2.81
SPHKAPQ2M3C7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
SPHKAPQ2M3C7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
SPHKAPQ2M3C7 FP325331.1-202ENST00000623531 1380 ntBASIC32.58■■■□□ 2.81
SPHKAPQ2M3C7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
SPHKAPQ2M3C7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC32.58■■■□□ 2.81
SPHKAPQ2M3C7 AC123595.1-201ENST00000440769 1046 ntBASIC32.58■■■□□ 2.81
SPHKAPQ2M3C7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC32.58■■■□□ 2.81
SPHKAPQ2M3C7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC32.58■■■□□ 2.81
SPHKAPQ2M3C7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
SPHKAPQ2M3C7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
SPHKAPQ2M3C7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.81
SPHKAPQ2M3C7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC32.57■■■□□ 2.81
SPHKAPQ2M3C7 AC092437.1-201ENST00000624794 1048 ntBASIC32.57■■■□□ 2.81
SPHKAPQ2M3C7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
SPHKAPQ2M3C7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC32.57■■■□□ 2.8
SPHKAPQ2M3C7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC32.57■■■□□ 2.8
SPHKAPQ2M3C7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
SPHKAPQ2M3C7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC32.57■■■□□ 2.8
SPHKAPQ2M3C7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
SPHKAPQ2M3C7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
SPHKAPQ2M3C7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
SPHKAPQ2M3C7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms