Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
RSPO4Q2I0M5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
RSPO4Q2I0M5 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
RSPO4Q2I0M5 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.95■■□□□ 1.1
RSPO4Q2I0M5 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
RSPO4Q2I0M5 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.95■■□□□ 1.1
RSPO4Q2I0M5 AC083906.2-201ENST00000511578 360 ntBASIC21.95■■□□□ 1.1
RSPO4Q2I0M5 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
RSPO4Q2I0M5 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.95■■□□□ 1.1
RSPO4Q2I0M5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RSPO4Q2I0M5 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.95■■□□□ 1.1
RSPO4Q2I0M5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
RSPO4Q2I0M5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RSPO4Q2I0M5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RSPO4Q2I0M5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RSPO4Q2I0M5 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
RSPO4Q2I0M5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RSPO4Q2I0M5 TSPY6P-201ENST00000448518 926 ntBASIC21.94■■□□□ 1.1
RSPO4Q2I0M5 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RSPO4Q2I0M5 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.94■■□□□ 1.1
RSPO4Q2I0M5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
RSPO4Q2I0M5 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RSPO4Q2I0M5 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RSPO4Q2I0M5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RSPO4Q2I0M5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RSPO4Q2I0M5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RSPO4Q2I0M5 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RSPO4Q2I0M5 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
RSPO4Q2I0M5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
RSPO4Q2I0M5 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RSPO4Q2I0M5 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.93■■□□□ 1.1
RSPO4Q2I0M5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.93■■□□□ 1.1
RSPO4Q2I0M5 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.93■■□□□ 1.1
RSPO4Q2I0M5 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.93■■□□□ 1.1
RSPO4Q2I0M5 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RSPO4Q2I0M5 DUX4L4-201ENST00000566884 1269 ntBASIC21.93■■□□□ 1.1
RSPO4Q2I0M5 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RSPO4Q2I0M5 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RSPO4Q2I0M5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RSPO4Q2I0M5 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
RSPO4Q2I0M5 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RSPO4Q2I0M5 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RSPO4Q2I0M5 KRT19P1-201ENST00000405746 1186 ntBASIC21.92■■□□□ 1.1
RSPO4Q2I0M5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.92■■□□□ 1.1
RSPO4Q2I0M5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RSPO4Q2I0M5 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RSPO4Q2I0M5 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RSPO4Q2I0M5 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RSPO4Q2I0M5 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RSPO4Q2I0M5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RSPO4Q2I0M5 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RSPO4Q2I0M5 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RSPO4Q2I0M5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RSPO4Q2I0M5 KRT18P11-201ENST00000435214 1283 ntBASIC21.91■■□□□ 1.1
RSPO4Q2I0M5 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.91■■□□□ 1.1
RSPO4Q2I0M5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.91■■□□□ 1.1
RSPO4Q2I0M5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.91■■□□□ 1.1
RSPO4Q2I0M5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.91■■□□□ 1.1
RSPO4Q2I0M5 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.91■■□□□ 1.1
RSPO4Q2I0M5 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RSPO4Q2I0M5 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
RSPO4Q2I0M5 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RSPO4Q2I0M5 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RSPO4Q2I0M5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
RSPO4Q2I0M5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RSPO4Q2I0M5 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RSPO4Q2I0M5 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RSPO4Q2I0M5 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RSPO4Q2I0M5 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RSPO4Q2I0M5 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.9■■□□□ 1.1
RSPO4Q2I0M5 AL138781.1-201ENST00000566567 1274 ntBASIC21.9■■□□□ 1.1
RSPO4Q2I0M5 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RSPO4Q2I0M5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RSPO4Q2I0M5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
RSPO4Q2I0M5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RSPO4Q2I0M5 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RSPO4Q2I0M5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RSPO4Q2I0M5 AC069152.1-201ENST00000438030 544 ntBASIC21.89■■□□□ 1.09
RSPO4Q2I0M5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.89■■□□□ 1.09
RSPO4Q2I0M5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.89■■□□□ 1.09
RSPO4Q2I0M5 AC010525.1-201ENST00000585559 441 ntBASIC21.89■■□□□ 1.09
RSPO4Q2I0M5 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.89■■□□□ 1.09
RSPO4Q2I0M5 AC097639.1-201ENST00000565519 1891 ntBASIC21.89■■□□□ 1.09
RSPO4Q2I0M5 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.89■■□□□ 1.09
RSPO4Q2I0M5 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RSPO4Q2I0M5 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RSPO4Q2I0M5 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.89■■□□□ 1.09
RSPO4Q2I0M5 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RSPO4Q2I0M5 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
RSPO4Q2I0M5 AC141586.4-201ENST00000624558 1573 ntBASIC21.88■■□□□ 1.09
RSPO4Q2I0M5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
RSPO4Q2I0M5 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RSPO4Q2I0M5 KRT18P29-201ENST00000397031 1267 ntBASIC21.88■■□□□ 1.09
RSPO4Q2I0M5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RSPO4Q2I0M5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.88■■□□□ 1.09
RSPO4Q2I0M5 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.88■■□□□ 1.09
RSPO4Q2I0M5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RSPO4Q2I0M5 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RSPO4Q2I0M5 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RSPO4Q2I0M5 AL121749.1-202ENST00000609313 2153 ntBASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms