Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 RARRES2P6-201ENST00000567333 442 ntBASIC27.13■■□□□ 1.93
PDS5AQ29RF7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PDS5AQ29RF7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
PDS5AQ29RF7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC27.12■■□□□ 1.93
PDS5AQ29RF7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
PDS5AQ29RF7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PDS5AQ29RF7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PDS5AQ29RF7 SLC47A1P1-202ENST00000449666 945 ntBASIC27.12■■□□□ 1.93
PDS5AQ29RF7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC27.12■■□□□ 1.93
PDS5AQ29RF7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PDS5AQ29RF7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC27.12■■□□□ 1.93
PDS5AQ29RF7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC27.12■■□□□ 1.93
PDS5AQ29RF7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC27.12■■□□□ 1.93
PDS5AQ29RF7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PDS5AQ29RF7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PDS5AQ29RF7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PDS5AQ29RF7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PDS5AQ29RF7 AC026271.2-201ENST00000428091 497 ntBASIC27.11■■□□□ 1.93
PDS5AQ29RF7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
PDS5AQ29RF7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC27.11■■□□□ 1.93
PDS5AQ29RF7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC27.1■■□□□ 1.93
PDS5AQ29RF7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC27.1■■□□□ 1.93
PDS5AQ29RF7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC27.1■■□□□ 1.93
PDS5AQ29RF7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
PDS5AQ29RF7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PDS5AQ29RF7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PDS5AQ29RF7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
PDS5AQ29RF7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC27.1■■□□□ 1.93
PDS5AQ29RF7 OR2I1P-207ENST00000453522 948 ntBASIC27.1■■□□□ 1.93
PDS5AQ29RF7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PDS5AQ29RF7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
PDS5AQ29RF7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC27.1■■□□□ 1.93
PDS5AQ29RF7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PDS5AQ29RF7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
PDS5AQ29RF7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC27.09■■□□□ 1.93
PDS5AQ29RF7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
PDS5AQ29RF7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
PDS5AQ29RF7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PDS5AQ29RF7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
PDS5AQ29RF7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PDS5AQ29RF7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC27.08■■□□□ 1.93
PDS5AQ29RF7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC27.08■■□□□ 1.93
PDS5AQ29RF7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC27.08■■□□□ 1.93
PDS5AQ29RF7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PDS5AQ29RF7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.93
PDS5AQ29RF7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.92
PDS5AQ29RF7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC27.07■■□□□ 1.92
PDS5AQ29RF7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
PDS5AQ29RF7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PDS5AQ29RF7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC27.07■■□□□ 1.92
PDS5AQ29RF7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC27.07■■□□□ 1.92
PDS5AQ29RF7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC27.07■■□□□ 1.92
PDS5AQ29RF7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC27.06■■□□□ 1.92
PDS5AQ29RF7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC27.06■■□□□ 1.92
PDS5AQ29RF7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
PDS5AQ29RF7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC27.06■■□□□ 1.92
PDS5AQ29RF7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC27.06■■□□□ 1.92
PDS5AQ29RF7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PDS5AQ29RF7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PDS5AQ29RF7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
PDS5AQ29RF7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PDS5AQ29RF7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
PDS5AQ29RF7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PDS5AQ29RF7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC27.06■■□□□ 1.92
PDS5AQ29RF7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
PDS5AQ29RF7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PDS5AQ29RF7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PDS5AQ29RF7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC27.05■■□□□ 1.92
PDS5AQ29RF7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC27.05■■□□□ 1.92
PDS5AQ29RF7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PDS5AQ29RF7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PDS5AQ29RF7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
PDS5AQ29RF7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PDS5AQ29RF7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PDS5AQ29RF7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PDS5AQ29RF7 IRS3P-201ENST00000223076 1006 ntBASIC27.04■■□□□ 1.92
PDS5AQ29RF7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PDS5AQ29RF7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC27.04■■□□□ 1.92
PDS5AQ29RF7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PDS5AQ29RF7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PDS5AQ29RF7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
PDS5AQ29RF7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PDS5AQ29RF7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
PDS5AQ29RF7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PDS5AQ29RF7 GRAMD4P2-201ENST00000423297 1097 ntBASIC27.03■■□□□ 1.92
PDS5AQ29RF7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
PDS5AQ29RF7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PDS5AQ29RF7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PDS5AQ29RF7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
PDS5AQ29RF7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PDS5AQ29RF7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
PDS5AQ29RF7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PDS5AQ29RF7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
PDS5AQ29RF7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
PDS5AQ29RF7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC27.02■■□□□ 1.92
PDS5AQ29RF7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC27.02■■□□□ 1.92
PDS5AQ29RF7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC27.02■■□□□ 1.92
PDS5AQ29RF7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PDS5AQ29RF7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
PDS5AQ29RF7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms