Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HSPG2P98160 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.17□□□□□ -0.14
HSPG2P98160 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HSPG2P98160 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.16□□□□□ -0.14
HSPG2P98160 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.16□□□□□ -0.14
HSPG2P98160 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.16□□□□□ -0.14
HSPG2P98160 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HSPG2P98160 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HSPG2P98160 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.16□□□□□ -0.14
HSPG2P98160 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC14.16□□□□□ -0.14
HSPG2P98160 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HSPG2P98160 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HSPG2P98160 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HSPG2P98160 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC14.16□□□□□ -0.14
HSPG2P98160 KRT18P11-201ENST00000435214 1283 ntBASIC14.15□□□□□ -0.14
HSPG2P98160 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.15□□□□□ -0.14
HSPG2P98160 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
HSPG2P98160 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HSPG2P98160 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HSPG2P98160 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HSPG2P98160 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HSPG2P98160 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HSPG2P98160 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HSPG2P98160 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HSPG2P98160 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC14.15□□□□□ -0.14
HSPG2P98160 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC14.15□□□□□ -0.14
HSPG2P98160 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.15□□□□□ -0.14
HSPG2P98160 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.15□□□□□ -0.14
HSPG2P98160 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HSPG2P98160 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HSPG2P98160 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC14.15□□□□□ -0.14
HSPG2P98160 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.15□□□□□ -0.14
HSPG2P98160 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.15□□□□□ -0.14
HSPG2P98160 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HSPG2P98160 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HSPG2P98160 SHD-204ENST00000599689 1729 ntTSL 5 BASIC14.14□□□□□ -0.15
HSPG2P98160 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HSPG2P98160 LHPP-203ENST00000392757 840 ntTSL 3 BASIC14.14□□□□□ -0.15
HSPG2P98160 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HSPG2P98160 MAZ-216ENST00000616501 991 ntTSL 5 BASIC14.14□□□□□ -0.15
HSPG2P98160 ERN1-208ENST00000606895 2068 ntBASIC14.14□□□□□ -0.15
HSPG2P98160 GCSHP5-201ENST00000443090 522 ntBASIC14.14□□□□□ -0.15
HSPG2P98160 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HSPG2P98160 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HSPG2P98160 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
HSPG2P98160 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
HSPG2P98160 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
HSPG2P98160 AC073210.2-201ENST00000430369 194 ntBASIC14.14□□□□□ -0.15
HSPG2P98160 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HSPG2P98160 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HSPG2P98160 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HSPG2P98160 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HSPG2P98160 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
HSPG2P98160 OR2I1P-207ENST00000453522 948 ntBASIC14.13□□□□□ -0.15
HSPG2P98160 SMUG1P1-201ENST00000590640 811 ntBASIC14.13□□□□□ -0.15
HSPG2P98160 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HSPG2P98160 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HSPG2P98160 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HSPG2P98160 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HSPG2P98160 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HSPG2P98160 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.13□□□□□ -0.15
HSPG2P98160 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.13□□□□□ -0.15
HSPG2P98160 STK32C-205ENST00000456004 607 ntTSL 2 BASIC14.13□□□□□ -0.15
HSPG2P98160 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.13□□□□□ -0.15
HSPG2P98160 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HSPG2P98160 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HSPG2P98160 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HSPG2P98160 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HSPG2P98160 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
HSPG2P98160 AC087239.1-201ENST00000622671 572 ntBASIC14.12□□□□□ -0.15
HSPG2P98160 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC14.12□□□□□ -0.15
HSPG2P98160 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HSPG2P98160 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC14.12□□□□□ -0.15
HSPG2P98160 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HSPG2P98160 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.12□□□□□ -0.15
HSPG2P98160 AC092118.2-201ENST00000613495 667 ntBASIC14.12□□□□□ -0.15
HSPG2P98160 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
HSPG2P98160 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HSPG2P98160 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
HSPG2P98160 ITM2C-210ENST00000620962 501 ntBASIC14.11□□□□□ -0.15
HSPG2P98160 MPST-204ENST00000404393 1329 ntTSL 5 BASIC14.11□□□□□ -0.15
HSPG2P98160 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HSPG2P98160 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.11□□□□□ -0.15
HSPG2P98160 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HSPG2P98160 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HSPG2P98160 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HSPG2P98160 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC14.11□□□□□ -0.15
HSPG2P98160 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
HSPG2P98160 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HSPG2P98160 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HSPG2P98160 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HSPG2P98160 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC14.11□□□□□ -0.15
HSPG2P98160 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC14.11□□□□□ -0.15
HSPG2P98160 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
HSPG2P98160 AC097639.1-201ENST00000565519 1891 ntBASIC14.11□□□□□ -0.15
HSPG2P98160 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HSPG2P98160 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.11□□□□□ -0.15
HSPG2P98160 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.11□□□□□ -0.15
HSPG2P98160 AC010525.1-201ENST00000585559 441 ntBASIC14.11□□□□□ -0.15
HSPG2P98160 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms