Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HSPG2P98160 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.17□□□□□ -0.14
HSPG2P98160 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HSPG2P98160 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.16□□□□□ -0.14
HSPG2P98160 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.16□□□□□ -0.14
HSPG2P98160 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.16□□□□□ -0.14
HSPG2P98160 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HSPG2P98160 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HSPG2P98160 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.16□□□□□ -0.14
HSPG2P98160 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC14.16□□□□□ -0.14
HSPG2P98160 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HSPG2P98160 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HSPG2P98160 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HSPG2P98160 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC14.16□□□□□ -0.14
HSPG2P98160 KRT18P11-201ENST00000435214 1283 ntBASIC14.15□□□□□ -0.14
HSPG2P98160 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.15□□□□□ -0.14
HSPG2P98160 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
HSPG2P98160 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HSPG2P98160 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HSPG2P98160 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HSPG2P98160 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HSPG2P98160 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HSPG2P98160 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HSPG2P98160 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HSPG2P98160 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC14.15□□□□□ -0.14
HSPG2P98160 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC14.15□□□□□ -0.14
HSPG2P98160 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.15□□□□□ -0.14
HSPG2P98160 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.15□□□□□ -0.14
HSPG2P98160 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HSPG2P98160 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HSPG2P98160 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC14.15□□□□□ -0.14
HSPG2P98160 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.15□□□□□ -0.14
HSPG2P98160 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.15□□□□□ -0.14
HSPG2P98160 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HSPG2P98160 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HSPG2P98160 SHD-204ENST00000599689 1729 ntTSL 5 BASIC14.14□□□□□ -0.15
HSPG2P98160 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HSPG2P98160 LHPP-203ENST00000392757 840 ntTSL 3 BASIC14.14□□□□□ -0.15
HSPG2P98160 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HSPG2P98160 MAZ-216ENST00000616501 991 ntTSL 5 BASIC14.14□□□□□ -0.15
HSPG2P98160 ERN1-208ENST00000606895 2068 ntBASIC14.14□□□□□ -0.15
HSPG2P98160 GCSHP5-201ENST00000443090 522 ntBASIC14.14□□□□□ -0.15
HSPG2P98160 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HSPG2P98160 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HSPG2P98160 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
HSPG2P98160 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
HSPG2P98160 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
HSPG2P98160 AC073210.2-201ENST00000430369 194 ntBASIC14.14□□□□□ -0.15
HSPG2P98160 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HSPG2P98160 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HSPG2P98160 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HSPG2P98160 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HSPG2P98160 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
HSPG2P98160 OR2I1P-207ENST00000453522 948 ntBASIC14.13□□□□□ -0.15
HSPG2P98160 SMUG1P1-201ENST00000590640 811 ntBASIC14.13□□□□□ -0.15
HSPG2P98160 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HSPG2P98160 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HSPG2P98160 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HSPG2P98160 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HSPG2P98160 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HSPG2P98160 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.13□□□□□ -0.15
HSPG2P98160 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.13□□□□□ -0.15
HSPG2P98160 STK32C-205ENST00000456004 607 ntTSL 2 BASIC14.13□□□□□ -0.15
HSPG2P98160 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.13□□□□□ -0.15
HSPG2P98160 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HSPG2P98160 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HSPG2P98160 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HSPG2P98160 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HSPG2P98160 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
HSPG2P98160 AC087239.1-201ENST00000622671 572 ntBASIC14.12□□□□□ -0.15
HSPG2P98160 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC14.12□□□□□ -0.15
HSPG2P98160 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HSPG2P98160 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC14.12□□□□□ -0.15
HSPG2P98160 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HSPG2P98160 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.12□□□□□ -0.15
HSPG2P98160 AC092118.2-201ENST00000613495 667 ntBASIC14.12□□□□□ -0.15
HSPG2P98160 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
HSPG2P98160 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HSPG2P98160 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
HSPG2P98160 ITM2C-210ENST00000620962 501 ntBASIC14.11□□□□□ -0.15
HSPG2P98160 MPST-204ENST00000404393 1329 ntTSL 5 BASIC14.11□□□□□ -0.15
HSPG2P98160 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HSPG2P98160 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.11□□□□□ -0.15
HSPG2P98160 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HSPG2P98160 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HSPG2P98160 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HSPG2P98160 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC14.11□□□□□ -0.15
HSPG2P98160 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
HSPG2P98160 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HSPG2P98160 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HSPG2P98160 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HSPG2P98160 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC14.11□□□□□ -0.15
HSPG2P98160 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC14.11□□□□□ -0.15
HSPG2P98160 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
HSPG2P98160 AC097639.1-201ENST00000565519 1891 ntBASIC14.11□□□□□ -0.15
HSPG2P98160 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HSPG2P98160 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.11□□□□□ -0.15
HSPG2P98160 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.11□□□□□ -0.15
HSPG2P98160 AC010525.1-201ENST00000585559 441 ntBASIC14.11□□□□□ -0.15
HSPG2P98160 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms