Protein–RNA interactions for Protein: P54821

PRRX1, Paired mesoderm homeobox protein 1, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1P54821 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRRX1P54821 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRRX1P54821 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRRX1P54821 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRRX1P54821 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.37■□□□□ 0.53
PRRX1P54821 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRRX1P54821 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRRX1P54821 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRRX1P54821 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRRX1P54821 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRRX1P54821 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRRX1P54821 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRRX1P54821 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.37■□□□□ 0.53
PRRX1P54821 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.37■□□□□ 0.53
PRRX1P54821 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRRX1P54821 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PRRX1P54821 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PRRX1P54821 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PRRX1P54821 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRRX1P54821 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PRRX1P54821 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
PRRX1P54821 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.36■□□□□ 0.53
PRRX1P54821 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRRX1P54821 AC079834.2-201ENST00000609776 1949 ntBASIC18.35■□□□□ 0.53
PRRX1P54821 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRRX1P54821 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRRX1P54821 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.35■□□□□ 0.53
PRRX1P54821 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRRX1P54821 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PRRX1P54821 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.35■□□□□ 0.53
PRRX1P54821 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.35■□□□□ 0.53
PRRX1P54821 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.35■□□□□ 0.53
PRRX1P54821 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRRX1P54821 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRRX1P54821 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRRX1P54821 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRRX1P54821 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.34■□□□□ 0.53
PRRX1P54821 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRRX1P54821 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRRX1P54821 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRRX1P54821 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRRX1P54821 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.34■□□□□ 0.53
PRRX1P54821 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRRX1P54821 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PRRX1P54821 ANOS2P-203ENST00000472227 1816 ntBASIC18.34■□□□□ 0.53
PRRX1P54821 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.34■□□□□ 0.53
PRRX1P54821 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PRRX1P54821 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.33■□□□□ 0.53
PRRX1P54821 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRRX1P54821 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PRRX1P54821 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
PRRX1P54821 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.33■□□□□ 0.52
PRRX1P54821 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.33■□□□□ 0.52
PRRX1P54821 AL117332.1-201ENST00000622628 974 ntBASIC18.33■□□□□ 0.52
PRRX1P54821 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PRRX1P54821 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PRRX1P54821 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.33■□□□□ 0.52
PRRX1P54821 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRRX1P54821 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRRX1P54821 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRRX1P54821 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRRX1P54821 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.33■□□□□ 0.52
PRRX1P54821 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRRX1P54821 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRRX1P54821 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRRX1P54821 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRRX1P54821 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRRX1P54821 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.32■□□□□ 0.52
PRRX1P54821 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRRX1P54821 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.32■□□□□ 0.52
PRRX1P54821 MIR3621-201ENST00000580529 85 ntBASIC18.32■□□□□ 0.52
PRRX1P54821 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRRX1P54821 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRRX1P54821 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRRX1P54821 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRRX1P54821 CLDN5-201ENST00000403084 2357 ntBASIC18.32■□□□□ 0.52
PRRX1P54821 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRRX1P54821 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PRRX1P54821 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRRX1P54821 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRRX1P54821 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.31■□□□□ 0.52
PRRX1P54821 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRRX1P54821 AC092068.2-201ENST00000590491 1708 ntBASIC18.31■□□□□ 0.52
PRRX1P54821 AC009102.2-201ENST00000606772 1639 ntBASIC18.31■□□□□ 0.52
PRRX1P54821 FP325331.1-202ENST00000623531 1380 ntBASIC18.3■□□□□ 0.52
PRRX1P54821 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRRX1P54821 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PRRX1P54821 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRRX1P54821 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.3■□□□□ 0.52
PRRX1P54821 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRRX1P54821 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRRX1P54821 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.3■□□□□ 0.52
PRRX1P54821 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRRX1P54821 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.3■□□□□ 0.52
PRRX1P54821 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.3■□□□□ 0.52
PRRX1P54821 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PRRX1P54821 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRRX1P54821 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRRX1P54821 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRRX1P54821 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 246.5 ms